Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0233800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-80 303.1 156 100.0
Dinv13485 Davidia involucrata HOM05D000412 ORTHO05D000429 1.0e-15 87.4 80 62.5
Rhsim10G0144400 Rhododendron simsii HOM05D000030 ORTHO05D000031 2.2e-13 79.7 53 73.6
CSS0027862 Camellia sinensis var. sinensis HOM05D000412 ORTHO05D000429 4.1e-12 75.5 85 61.2
Actinidia39345 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.2e-11 73.9 81 58.0
Ciclev10014439m.g Citrus clementina HOM05D000412 ORTHO05D000429 2.0e-11 73.2 81 55.6
RhsimUnG0150000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-10 70.5 62 59.7
Actinidia30438 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.7e-10 70.1 81 53.1
Actinidia16233 Actinidia chinensis HOM05D000412 ORTHO05D000429 3.8e-10 68.9 77 57.1
GSVIVG01025494001 Vitis vinifera HOM05D000412 ORTHO05D000429 3.8e-10 68.9 79 54.4
Migut.N00538 Erythranthe guttata HOM05D000412 ORTHO05D000429 5.0e-10 68.6 81 49.4
Rhsim02G0034500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.9e-09 66.6 68 55.9
QL01p010560 Quercus lobata HOM05D000412 ORTHO05D000429 2.5e-09 66.2 80 51.2
Rhsim12G0091200 Rhododendron simsii HOM05D000030 ORTHO05D339809 2.5e-09 66.2 64 53.1
Rhsim09G0078900 Rhododendron simsii HOM05D000030 ORTHO05D000031 4.2e-09 65.5 85 45.9
Atru.chr3.2369 Acer truncatum HOM05D000412 ORTHO05D000429 5.5e-09 65.1 79 54.4
Rhsim12G0116200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.5e-09 65.1 105 42.9
QL01p010547 Quercus lobata HOM05D000412 ORTHO05D000429 7.2e-09 64.7 79 46.8
Rhsim08G0083100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-08 63.2 65 53.8
Eucgr.B03590 Eucalyptus grandis HOM05D000412 ORTHO05D000429 2.7e-08 62.8 80 51.2
Rhsim07G0239000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-08 62.8 66 51.5
Rhsim10G0119100 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-08 62.4 60 51.7
Rhsim03G0071200 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-08 62.0 75 50.7
Rhsim05G0082600 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-08 62.0 66 51.5
RhsimUnG0100400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-08 62.0 65 52.3
Rhsim04G0127100 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.1e-08 61.6 47 63.8
Prupe.6G002200 Prunus persica HOM05D000412 ORTHO05D000429 8.0e-08 61.2 80 50.0
Rhsim03G0100100 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.0e-08 61.2 65 53.8
Rhsim12G0047200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.0e-08 61.2 48 66.7
Nitab4.5_0002068g0020 Nicotiana tabacum HOM05D000412 ORTHO05D000429 1.0e-07 60.8 81 46.9
Peaxi162Scf00200g00710 Petunia axillaris HOM05D000412 ORTHO05D000429 1.0e-07 60.8 81 48.1
Rhsim02G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-07 60.5 62 51.6
Rhsim10G0102100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-07 60.5 67 50.7
Rhsim09G0124200 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.0e-07 58.9 48 64.6
Actinidia37351 Actinidia chinensis HOM05D000412 ORTHO05D000429 5.2e-07 58.5 78 51.3
Rhsim04G0130100 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.7e-07 58.2 67 47.8
TPR.G6776 Trifolium pratense HOM05D000412 ORTHO05D000429 1.2e-06 57.4 80 48.8
CAN.G270.9 Capsicum annuum HOM05D000412 ORTHO05D000429 1.5e-06 57.0 81 44.4
Ca_17849_v3 Cicer arietinum L. HOM05D000412 ORTHO05D000429 1.5e-06 57.0 80 47.5
Ca_29713_v3 Cicer arietinum L. HOM05D000412 ORTHO05D000429 1.5e-06 57.0 80 47.5
Rhsim05G0072700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-06 56.6 43 69.8
Rhsim05G0198700 Rhododendron simsii HOM05D000030 ORTHO05D030540 2.0e-06 56.6 60 51.7
Rhsim09G0081600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-06 56.6 43 69.8
Rhsim02G0100400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.3e-06 55.8 67 49.3
Cfa009544 Carpinus fangiana HOM05D000412 ORTHO05D000429 4.4e-06 55.5 90 46.7
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 4.4e-06 55.5 60 51.7
MD03G1002500 Malus domestica HOM05D000412 ORTHO05D000429 5.7e-06 55.1 80 46.2
Nitab4.5_0001958g0010 Nicotiana tabacum HOM05D000412 ORTHO05D000429 5.7e-06 55.1 79 48.1
Rhsim02G0095800 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.7e-06 55.1 50 62.0


User provided reference genes

Program Settings