Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 5.1e-75 284.3 138 100.0
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 2.2e-46 189.1 103 90.3
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 8.3e-41 170.6 125 75.2
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 1.1e-40 170.2 92 91.3
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 1.2e-39 166.8 122 72.1
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 9.4e-37 157.1 120 63.3
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 3.4e-34 148.7 114 65.8
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 7.5e-34 147.5 117 64.1
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 3.1e-32 142.1 131 59.5
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 5.9e-31 137.9 122 63.9
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 1.3e-30 136.7 116 62.1
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 1.1e-29 133.7 118 63.6
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 1.1e-29 133.7 116 57.8
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 3.3e-29 132.1 129 61.2
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 9.5e-29 130.6 122 59.0
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 2.8e-28 129.0 129 55.0
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.8e-27 126.3 126 57.9
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 5.2e-27 124.8 118 58.5
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 8.9e-27 124.0 126 57.9
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 1.2e-26 123.6 123 59.3
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 2.0e-26 122.9 125 55.2
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 2.6e-26 122.5 119 58.0
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 5.7e-26 121.3 116 61.2
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 2.2e-25 119.4 133 53.4
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 8.3e-25 117.5 135 51.9
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 1.1e-24 117.1 126 51.6
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.1e-24 117.1 114 54.4
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 1.8e-24 116.3 126 53.2
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 2.4e-24 115.9 131 53.4
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 3.5e-23 112.1 120 52.5
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 7.8e-23 110.9 132 48.5
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.0e-22 110.5 126 50.8
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 2.9e-22 109.0 120 53.3
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 3.9e-22 108.6 124 50.8
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 5.0e-22 108.2 122 46.7
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.6e-22 107.8 127 47.2
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.6e-22 107.8 124 47.6
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 8.6e-22 107.5 122 53.3
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 1.1e-21 107.1 133 48.1
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 3.3e-21 105.5 125 49.6
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 3.3e-21 105.5 122 52.5
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 4.3e-21 105.1 116 55.2
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 5.6e-21 104.8 132 45.5
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 5.6e-21 104.8 125 50.4
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 1.2e-20 103.6 123 50.4
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 2.1e-20 102.8 139 45.3
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 3.6e-20 102.1 136 47.8
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 1.0e-19 100.5 130 46.2
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 1.0e-19 100.5 147 49.7
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 1.0e-19 100.5 125 49.6
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 1.4e-19 100.1 155 40.6
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 4.0e-19 98.6 107 52.3
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 5.2e-19 98.2 122 47.5
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 5.2e-19 98.2 130 44.6
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 5.2e-19 98.2 120 48.3
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 5.8e-18 94.7 151 42.4
vmacro04244 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 1.7e-17 93.2 54 85.2
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 2.2e-17 92.8 151 41.7
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 4.9e-17 91.7 126 48.4
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 6.4e-17 91.3 127 44.9
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 1.1e-16 90.5 156 37.8
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 3.2e-16 89.0 154 38.3
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 7.0e-16 87.8 133 43.6
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 7.0e-16 87.8 144 43.1
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 7.0e-16 87.8 124 48.4
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 9.2e-16 87.4 151 39.1
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 2.7e-15 85.9 140 43.6
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 3.5e-15 85.5 143 38.5
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 3.5e-15 85.5 148 37.8
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 7.8e-15 84.3 144 42.4
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 7.8e-15 84.3 144 42.4
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.3e-14 83.6 124 45.2
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 3.9e-14 82.0 123 46.3
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 1.9e-13 79.7 144 38.2
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 3.3e-13 79.0 153 41.2
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 9.5e-13 77.4 149 36.2
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 1.2e-12 77.0 155 34.2
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 3.6e-12 75.5 142 40.1
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 1.8e-11 73.2 113 41.6
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 4.4e-10 68.6 133 36.8
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 1.3e-09 67.0 130 34.6
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 1.3e-09 67.0 122 42.6
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 6.4e-09 64.7 122 41.8
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 3.2e-08 62.4 131 36.6
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 7.8e-07 57.8 122 38.5
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 1.7e-06 56.6 120 35.8
Migut.N00543 Erythranthe guttata HOM05D007392 ORTHO05D009181 3.9e-06 55.5 116 36.2


User provided reference genes

Program Settings