Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.1e-182 643.3 342 100.0
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 5.8e-144 514.6 310 88.7
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 9.0e-129 464.2 310 81.3
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.5e-128 463.4 311 82.0
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 3.5e-125 452.2 310 79.7
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 4.9e-119 431.8 310 78.4
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 1.4e-118 430.3 313 75.4
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.6e-117 426.8 309 77.7
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 2.1e-117 426.4 308 76.6
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 7.9e-117 424.5 318 75.5
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 5.1e-116 421.8 310 75.8
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 6.7e-116 421.4 311 76.8
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 1.1e-115 420.6 311 74.6
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 1.9e-115 419.9 310 73.9
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 4.3e-115 418.7 310 73.5
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 4.3e-115 418.7 308 76.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 5.6e-115 418.3 310 74.8
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.6e-115 418.3 302 75.8
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 9.6e-115 417.5 312 74.0
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 1.6e-114 416.8 316 74.4
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.6e-114 416.8 313 75.1
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 1.6e-114 416.8 310 74.8
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.6e-114 416.8 311 74.0
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 2.8e-114 416.0 308 74.7
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.8e-114 416.0 310 73.2
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.7e-114 415.6 308 75.3
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 4.8e-114 415.2 309 73.8
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.1e-113 414.1 316 74.1
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 1.8e-113 413.3 312 75.0
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.1e-113 412.5 311 74.6
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 6.9e-113 411.4 318 73.0
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 9.0e-113 411.0 296 77.7
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 7.6e-112 407.9 312 74.0
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.3e-111 407.1 292 78.1
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 3.8e-111 405.6 295 76.9
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 6.4e-111 404.8 303 75.6
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.1e-110 404.1 310 74.2
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.4e-110 403.7 320 71.9
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.2e-110 402.5 310 73.9
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.2e-110 402.5 310 74.2
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 1.2e-109 400.6 309 72.2
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 3.5e-109 399.1 292 74.0
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 6.0e-109 398.3 309 73.1
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 1.8e-108 396.7 314 72.0
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 2.3e-108 396.4 296 75.3
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 2.3e-108 396.4 302 71.9
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 3.9e-108 395.6 302 71.9
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 6.7e-108 394.8 309 73.1
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 6.7e-108 394.8 301 73.8
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 1.1e-107 394.0 293 74.7
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 1.9e-107 393.3 309 70.6
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 5.6e-107 391.7 296 75.3
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 5.6e-107 391.7 310 72.9
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.3e-106 390.6 310 71.9
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 2.1e-106 389.8 302 71.9
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 2.8e-106 389.4 302 72.2
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 3.7e-106 389.0 304 73.0
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 4.8e-106 388.7 296 74.3
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 4.8e-106 388.7 295 74.2
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 6.9e-105 384.8 253 83.0
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 1.5e-104 383.6 253 82.6
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 2.6e-104 382.9 292 72.9
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 7.6e-104 381.3 309 68.9
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 8.4e-103 377.9 289 73.7
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 1.3e-100 370.5 307 68.1
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 9.7e-99 364.4 312 67.3
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 8.2e-98 361.3 293 70.0
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 4.5e-96 355.5 263 71.9
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 2.9e-95 352.8 242 77.7
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 3.2e-94 349.4 298 69.5
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 9.3e-94 347.8 246 74.8
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 1.6e-93 347.1 282 68.1
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.1e-91 340.9 308 63.0
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 2.5e-86 323.2 243 69.5
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 4.7e-85 318.9 312 61.2
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.3e-82 310.8 308 59.4
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.8e-82 309.7 243 65.0
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 5.3e-81 305.4 314 56.4
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 8.5e-71 271.6 186 77.4
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 2.0e-67 260.4 165 83.6
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 7.5e-67 258.5 176 79.0
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.4e-65 254.2 193 68.9
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 5.2e-60 235.7 144 91.0
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 4.8e-58 229.2 250 53.2
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 8.3e-58 228.4 234 59.4
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 1.7e-55 220.7 149 81.2
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 1.0e-52 211.5 196 64.3
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 4.5e-48 196.1 299 48.2
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 2.9e-42 176.8 125 78.4
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 4.7e-37 159.5 181 58.6
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 3.2e-33 146.7 103 74.8
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 4.1e-25 119.8 119 57.1
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 2.0e-19 100.9 130 50.0
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.7e-15 87.8 60 76.7
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 2.4e-09 67.4 47 74.5


User provided reference genes

Program Settings