Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 8.2e-61 236.9 121 100.0
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 1.3e-34 149.8 92 88.0
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 8.6e-26 120.6 78 80.8
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 6.2e-24 114.4 89 68.5
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 6.2e-24 114.4 96 62.5
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 1.0e-23 113.6 91 62.6
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 1.4e-23 113.2 86 68.6
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 4.0e-23 111.7 91 68.1
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 6.8e-23 110.9 86 69.8
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 8.9e-23 110.5 89 69.7
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.2e-22 110.2 91 62.6
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 1.2e-22 110.2 87 67.8
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 1.5e-22 109.8 91 69.2
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 2.0e-22 109.4 83 67.5
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 2.6e-22 109.0 80 68.8
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 3.4e-22 108.6 89 64.0
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 3.4e-22 108.6 84 69.0
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 5.8e-22 107.8 91 68.1
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 9.8e-22 107.1 82 65.9
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.3e-21 106.7 83 68.7
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 1.3e-21 106.7 93 61.3
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 4.9e-21 104.8 92 64.1
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 4.9e-21 104.8 87 66.7
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 4.9e-21 104.8 81 66.7
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 8.3e-21 104.0 85 69.4
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 1.1e-20 103.6 67 76.1
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 1.1e-20 103.6 67 76.1
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 1.4e-20 103.2 83 68.7
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 1.9e-20 102.8 91 65.9
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 4.1e-20 101.7 77 70.1
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 5.4e-20 101.3 93 60.2
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 7.0e-20 100.9 81 63.0
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 9.2e-20 100.5 86 69.8
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 3.5e-19 98.6 79 68.4
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 6.0e-19 97.8 89 59.6
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 7.8e-19 97.4 88 63.6
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 1.0e-18 97.1 74 70.3
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 2.3e-18 95.9 80 65.0
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 3.0e-18 95.5 83 60.2
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 5.0e-18 94.7 85 61.2
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 6.6e-18 94.4 76 65.8
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 6.6e-18 94.4 66 71.2
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 1.1e-17 93.6 76 65.8
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 1.9e-17 92.8 81 63.0
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 2.5e-17 92.4 79 64.6
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 4.3e-17 91.7 81 61.7
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 4.3e-17 91.7 79 62.0
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 5.6e-17 91.3 70 71.4
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 7.3e-17 90.9 79 63.3
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 7.3e-17 90.9 76 68.4
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 9.5e-17 90.5 87 63.2
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.2e-16 90.1 85 68.2
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 2.1e-16 89.4 76 61.8
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 2.8e-16 89.0 81 60.5
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 4.7e-16 88.2 87 59.8
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 6.2e-16 87.8 87 59.8
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 8.1e-16 87.4 81 60.5
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 1.1e-15 87.0 74 62.2
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 1.4e-15 86.7 84 57.1
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.3e-15 85.9 72 59.7
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 8.9e-15 84.0 69 66.7
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 1.5e-14 83.2 77 61.0
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 7.5e-14 80.9 77 57.1
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 7.5e-14 80.9 77 57.1
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 2.2e-13 79.3 77 62.3
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 2.2e-13 79.3 75 58.7
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 2.2e-13 79.3 76 57.9
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 1.1e-12 77.0 161 36.0
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 2.1e-11 72.8 49 67.3
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 1.5e-09 66.6 66 53.0
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 5.6e-09 64.7 101 47.5
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 6.8e-07 57.8 61 54.1


User provided reference genes

Program Settings