Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 8.4e-220 766.9 446 100.0
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.3e-132 476.5 459 66.0
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 3.0e-132 476.1 456 70.8
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 4.6e-125 452.2 606 50.5
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 2.6e-120 436.4 395 64.3
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 1.3e-108 397.5 410 60.0
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 1.8e-108 397.1 387 60.5
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 5.1e-108 395.6 386 60.1
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 9.6e-107 391.3 374 61.0
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 3.8e-103 379.4 367 60.2
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 8.4e-103 378.3 411 57.7
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 4.2e-102 375.9 393 57.5
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 9.3e-102 374.8 390 57.9
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 1.2e-101 374.4 391 55.2
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 1.2e-101 374.4 378 60.1
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 2.1e-101 373.6 386 56.5
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 3.5e-101 372.9 390 56.2
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 1.3e-100 370.9 374 60.2
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 2.3e-100 370.2 404 56.4
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 2.5e-99 366.7 404 55.9
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 1.3e-98 364.4 397 56.2
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 2.1e-98 363.6 397 56.2
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 1.4e-97 360.9 351 59.8
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 5.3e-97 359.0 377 57.8
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 5.3e-97 359.0 347 58.8
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 2.6e-96 356.7 303 67.3
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 2.6e-96 356.7 332 61.1
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 3.4e-96 356.3 384 57.0
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 5.8e-96 355.5 391 55.5
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 5.8e-96 355.5 350 58.9
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 7.6e-96 355.1 347 59.7
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 7.6e-96 355.1 350 58.6
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 7.6e-96 355.1 350 58.6
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.7e-95 354.0 312 60.9
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 2.9e-95 353.2 388 55.7
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 1.1e-94 351.3 375 54.9
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 1.1e-94 351.3 367 55.6
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 1.1e-94 351.3 364 57.7
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 2.5e-94 350.1 389 56.6
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 5.5e-94 349.0 343 58.0
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 2.7e-93 346.7 375 55.2
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 7.9e-93 345.1 365 57.3
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 2.3e-92 343.6 423 50.8
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 3.0e-92 343.2 326 59.5
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 6.7e-92 342.0 387 54.3
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 6.7e-92 342.0 391 54.5
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 8.7e-92 341.7 387 54.3
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 1.6e-90 337.4 440 50.0
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 1.6e-90 337.4 349 56.4
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 2.2e-90 337.0 339 59.6
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 6.3e-90 335.5 390 55.4
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 1.1e-89 334.7 366 57.1
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 9.0e-89 331.6 349 57.0
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 9.0e-89 331.6 347 57.1
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 5.9e-88 328.9 355 54.9
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 5.9e-88 328.9 339 57.8
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 1.1e-86 324.7 344 57.3
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.4e-86 324.3 372 53.5
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 1.9e-86 323.9 394 52.3
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.9e-86 323.9 390 51.5
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.6e-85 319.7 370 52.7
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 4.6e-85 319.3 340 57.1
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 5.1e-84 315.8 301 60.1
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 8.8e-84 315.1 393 51.7
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 9.7e-83 311.6 382 50.8
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 9.7e-83 311.6 435 47.8
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.3e-82 311.2 378 51.1
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 4.8e-82 309.3 296 59.8
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 6.9e-81 305.4 362 53.0
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 2.6e-80 303.5 391 51.2
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 7.7e-80 302.0 352 50.0
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 2.5e-78 297.0 381 50.9
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 4.2e-78 296.2 388 50.8
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 4.2e-78 296.2 388 50.8
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 9.4e-78 295.0 388 50.5
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 9.4e-78 295.0 323 54.8
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 6.1e-77 292.4 335 54.0
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 6.1e-77 292.4 329 55.0
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 6.1e-77 292.4 388 49.7
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 6.1e-77 292.4 387 48.1
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 6.1e-77 292.4 417 48.9
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 1.4e-76 291.2 407 46.7
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 9.7e-75 285.0 338 51.8
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 5.3e-73 279.3 344 51.5
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 9.1e-73 278.5 296 55.1
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 4.5e-72 276.2 309 53.7
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 7.7e-72 275.4 337 51.9
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 5.0e-71 272.7 282 58.2
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 6.5e-71 272.3 286 54.2
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 8.5e-71 271.9 330 51.2
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 1.1e-70 271.6 354 50.6
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 2.1e-69 267.3 398 45.2
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 2.3e-68 263.8 347 49.6
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 3.0e-68 263.5 258 57.0
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 1.5e-67 261.2 193 68.4
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.6e-67 260.4 236 63.1
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 7.4e-67 258.8 245 60.0
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 9.7e-67 258.5 245 59.6
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 9.7e-67 258.5 292 54.1
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 2.2e-66 257.3 245 60.0
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.8e-65 254.2 289 55.0
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 5.3e-65 252.7 245 60.0
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 3.8e-63 246.5 329 48.3
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 5.0e-63 246.1 275 54.5
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 8.5e-63 245.4 308 51.0
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 8.5e-63 245.4 246 57.3
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 2.5e-62 243.8 293 52.2
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 5.5e-62 242.7 244 58.6
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 5.5e-62 242.7 244 57.8
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 5.5e-62 242.7 244 58.6
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 2.6e-59 233.8 250 56.0
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 2.8e-58 230.3 260 54.6
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.2e-54 216.5 241 56.0
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 6.1e-53 212.6 248 50.0
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 1.5e-51 208.0 199 58.8
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 1.7e-50 204.5 189 60.3
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 5.9e-48 196.1 287 43.6
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 5.0e-47 193.0 343 41.4
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 1.0e-44 185.3 226 50.9
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 5.2e-44 183.0 159 66.0
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 2.9e-42 177.2 192 52.6
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 1.4e-41 174.9 265 46.0
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 9.2e-41 172.2 233 46.4
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 7.8e-40 169.1 251 45.4
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 2.9e-39 167.2 226 47.8
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 8.6e-39 165.6 238 45.4
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.9e-38 164.5 386 36.0
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 2.5e-38 164.1 348 36.8
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 4.3e-38 163.3 294 39.1
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 5.6e-38 162.9 155 61.3
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 2.0e-32 144.4 160 53.1
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 3.5e-32 143.7 120 62.5
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 6.0e-32 142.9 202 43.1
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 1.3e-31 141.7 159 52.2
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 1.1e-30 138.7 382 34.3
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 6.2e-29 132.9 165 48.5
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 6.2e-29 132.9 209 42.6
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.2e-26 124.4 72 83.3
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.7e-26 123.6 112 55.4
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 8.3e-26 122.5 72 81.9
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 8.3e-26 122.5 70 80.0
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.1e-24 117.9 143 45.5
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 6.0e-24 116.3 137 48.2
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.8e-20 104.8 70 68.6
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 4.0e-20 103.6 227 33.9
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 3.2e-17 94.0 118 41.5
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 9.2e-17 92.4 173 43.4
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 7.8e-16 89.4 76 64.5
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.0e-15 89.0 188 41.0
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-15 88.2 88 52.3
CSS0019808 Camellia sinensis var. sinensis HOM05D043465 ORTHO05D033917 7.3e-14 82.8 133 45.9
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 9.6e-14 82.4 161 43.5
CSS0039806 Camellia sinensis var. sinensis HOM05D043465 ORTHO05D033917 1.2e-13 82.0 133 45.9
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 4.7e-13 80.1 100 41.0
CSS0043633 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 6.2e-13 79.7 90 55.6
CSS0023566 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.8e-12 78.2 86 57.0
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 8.9e-12 75.9 165 37.0
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.2e-11 75.5 165 37.0
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.2e-11 75.5 165 37.0
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 6.4e-10 69.7 180 33.9
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 3.2e-09 67.4 276 25.7
SalBow5G0967 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.5e-08 63.9 71 53.5
TPR.G16979 Trifolium pratense HOM05D004030 ORTHO05D004952 3.0e-07 60.8 50 60.0
Cpa.g.sc7.86 Carica papaya HOM05D004030 ORTHO05D033917 2.5e-06 57.8 72 50.0
SalBow5G1360 Salvia bowleyana HOM05D004030 ORTHO05D004952 5.6e-06 56.6 74 44.6
Cre01.g021750 Chlamydomonas reinhardtii HOM05D004030 ORTHO05D004952 7.3e-06 56.2 121 31.4


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