Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 4.7e-117 424.9 265 100.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 3.9e-15 86.3 155 37.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 6.3e-13 79.0 258 29.8
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.5e-11 74.3 323 32.8
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 2.6e-11 73.6 261 27.2
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 3.4e-11 73.2 83 51.8
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 3.4e-11 73.2 270 38.1
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 5.9e-11 72.4 272 41.9
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.3e-10 71.2 289 36.7
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 2.2e-10 70.5 278 30.6
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.9e-10 70.1 255 29.8
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 3.8e-10 69.7 247 30.4
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 6.5e-10 68.9 83 51.8
Aqoxy4G00632 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 8.5e-10 68.6 288 38.2
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 1.4e-09 67.8 82 47.6
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 1.9e-09 67.4 82 50.0
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 3.2e-09 66.6 225 27.1
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 7.2e-09 65.5 230 27.4
Hma1.2p1_0002F.1_g002230 Hydrangea macrophylla HOM05D008876 ORTHO05D010747 2.1e-08 63.9 78 52.6
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 4.7e-08 62.8 263 28.1
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.1e-08 62.4 232 26.7
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 1.0e-07 61.6 139 41.0
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.8e-07 60.8 94 41.5
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.8e-07 60.8 134 38.8
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 2.3e-07 60.5 91 45.1
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 3.9e-07 59.7 135 43.7
Ciclev10016096m.g Citrus clementina HOM05D008876 ORTHO05D010747 8.8e-07 58.5 79 48.1
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 8.8e-07 58.5 278 37.4
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 8.8e-07 58.5 270 29.6
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.1e-06 58.2 263 35.4
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.5e-06 57.8 82 50.0
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.5e-06 57.8 82 50.0
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 2.0e-06 57.4 80 46.2
Dinv06861 Davidia involucrata HOM05D008876 ORTHO05D010747 2.6e-06 57.0 77 49.4
Duzib132G0209 Durio zibethinus HOM05D008876 ORTHO05D010747 2.6e-06 57.0 75 49.3
Duzib132G0342 Durio zibethinus HOM05D008876 ORTHO05D010747 2.6e-06 57.0 75 49.3
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.6e-06 57.0 143 35.0
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.3e-06 56.6 89 46.1
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 3.3e-06 56.6 88 46.6
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 4.4e-06 56.2 292 30.8
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 4.4e-06 56.2 261 26.1
Lj1P691T50 Lonicera japonica HOM05D008876 ORTHO05D010747 4.4e-06 56.2 79 48.1
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 5.7e-06 55.8 64 54.7
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 7.4e-06 55.5 84 46.4
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 9.7e-06 55.1 89 43.8


User provided reference genes

Program Settings