Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 7.6e-49 196.8 98 100.0
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 9.4e-23 110.2 86 67.4
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 6.7e-21 104.0 86 64.0
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.7e-19 98.2 86 60.5
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 3.6e-14 81.6 85 51.8
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.8e-13 79.3 86 52.3
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 3.0e-13 78.6 87 52.9
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 4.0e-13 78.2 85 54.1
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.2e-12 76.6 85 45.9
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 2.0e-12 75.9 88 50.0
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 2.6e-12 75.5 86 48.8
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 2.6e-12 75.5 88 50.0
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 4.4e-12 74.7 88 50.0
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 4.4e-12 74.7 88 48.9
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 7.5e-12 73.9 81 48.1
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 1.3e-11 73.2 85 48.2
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.3e-11 73.2 84 45.2
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 1.7e-11 72.8 85 48.2
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 1.7e-11 72.8 87 46.0
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 2.2e-11 72.4 86 44.2
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.8e-11 72.0 81 50.6
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 2.8e-11 72.0 86 45.3
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 3.7e-11 71.6 85 49.4
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 4.8e-11 71.2 83 43.4
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 4.8e-11 71.2 88 48.9
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 8.3e-11 70.5 85 43.5
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 8.3e-11 70.5 81 50.6
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.1e-10 70.1 84 45.2
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.1e-10 70.1 88 45.5
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 1.4e-10 69.7 85 45.9
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 1.4e-10 69.7 84 42.9
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 2.4e-10 68.9 87 41.4
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.4e-10 68.9 88 45.5
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 4.1e-10 68.2 86 41.9
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 5.4e-10 67.8 86 48.8
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 7.0e-10 67.4 85 44.7
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 7.0e-10 67.4 86 43.0
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 7.0e-10 67.4 86 46.5
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 7.0e-10 67.4 79 44.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 9.1e-10 67.0 82 46.3
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 9.1e-10 67.0 100 38.0
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 1.2e-09 66.6 87 43.7
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 1.2e-09 66.6 87 41.4
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.2e-09 66.6 82 40.2
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 1.2e-09 66.6 89 40.4
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.6e-09 66.2 83 45.8
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.0e-09 65.9 100 39.0
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 2.7e-09 65.5 84 39.3
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 4.5e-09 64.7 86 44.2
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 5.9e-09 64.3 86 44.2
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.7e-08 62.8 100 37.0
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.7e-08 62.8 82 48.8
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.7e-08 62.8 84 41.7
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 2.2e-08 62.4 104 39.4
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 2.9e-08 62.0 104 38.5
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 2.9e-08 62.0 82 48.8
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 3.8e-08 61.6 86 40.7
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 5.0e-08 61.2 83 42.2
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 5.0e-08 61.2 87 43.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 5.0e-08 61.2 84 42.9
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 6.5e-08 60.8 86 44.2
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 6.5e-08 60.8 88 44.3
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.1e-07 60.1 93 45.2
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.5e-07 59.7 87 41.4
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.9e-07 59.3 83 42.2
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.9e-07 59.3 73 45.2
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.2e-07 58.5 86 36.0
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 1.2e-06 56.6 77 44.2
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.6e-06 56.2 80 40.0
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 2.7e-06 55.5 86 43.0
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.7e-06 54.7 90 34.4
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 4.7e-06 54.7 90 34.4
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 4.7e-06 54.7 87 40.2


User provided reference genes

Program Settings