Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0171100 Rhododendron simsii HOM05D000101 ORTHO05D013107 2.0e-175 619.0 310 100.0
Rhsim13G0170800 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.0e-75 287.7 164 87.8
Rhsim13G0171300 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.8e-75 287.0 166 86.1
Rhsim13G0171500 Rhododendron simsii HOM05D000101 ORTHO05D000089 8.2e-73 278.1 165 86.1
vmacro01393 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 1.7e-54 217.2 166 68.1
vmacro00949 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 5.2e-51 205.7 166 65.1
Rhsim04G0237100 Rhododendron simsii HOM05D000101 ORTHO05D000089 6.8e-51 205.3 166 65.1
Rhsim04G0236100 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.7e-49 200.7 166 63.3
Rhsim04G0237800 Rhododendron simsii HOM05D000101 ORTHO05D000089 4.9e-49 199.1 166 63.3
Rhsim04G0236300 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.4e-48 197.6 166 62.7
Rhsim04G0236600 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.4e-48 196.8 166 62.7
Rhsim04G0236700 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.6e-47 194.1 161 63.4
Rhsim04G0235600 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.0e-46 191.4 165 61.2
Rhsim04G0237500 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.6e-45 185.7 167 59.9
Rhsim04G0238000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.2e-44 184.5 173 59.5
Rhsim12G0030900 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.6e-42 176.8 166 56.0
Rhsim12G0034700 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.7e-39 166.8 165 55.8
Rhsim12G0032300 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.0e-38 163.3 166 53.6
Rhsim12G0034200 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.1e-37 161.4 166 53.0
Rhsim12G0032900 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.3e-37 159.5 165 54.5
Rhsim12G0032800 Rhododendron simsii HOM05D000101 ORTHO05D000089 7.3e-37 158.7 166 53.6
Rhsim12G0031900 Rhododendron simsii HOM05D000101 ORTHO05D000089 3.6e-36 156.4 166 53.0
Rhsim12G0033300 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.4e-35 154.5 165 52.1
Rhsim12G0032100 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.8e-35 154.1 166 53.6
Rhsim12G0032400 Rhododendron simsii HOM05D000101 ORTHO05D000089 6.8e-35 152.1 152 55.3
Rhsim12G0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 8.9e-35 151.8 164 54.3
Rhsim12G0032500 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.5e-34 151.0 153 55.6
Rhsim12G0031500 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.0e-34 150.6 161 52.8
Rhsim12G0033900 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.2e-32 143.3 160 50.6
Dinv21052 Davidia involucrata HOM05D000178 ORTHO05D003282 4.0e-27 126.3 157 45.9
Rhsim12G0033000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.3e-25 121.3 131 50.4
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 4.9e-25 119.4 156 39.7
Rhsim12G0033200 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.6e-23 114.4 159 43.4
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 7.3e-21 105.5 139 43.9
Dinv07775 Davidia involucrata HOM05D000004 ORTHO05D000002 9.6e-21 105.1 139 43.9
Nn7g36835 Nelumbo nucifera HOM05D000101 ORTHO05D000089 6.2e-20 102.4 158 37.3
Rhsim12G0031200 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.4e-18 96.7 92 56.5
MBI11_g10519_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.3e-16 88.6 157 32.5
MBI11_g47636_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.2e-15 88.2 155 31.0
MBI11_g12656_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.1e-15 87.4 157 30.6
Rhsim13G0171400 Rhododendron simsii HOM05D000101 ORTHO05D000089 8.7e-14 82.0 84 53.6
GSVIVG01016962001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.5e-13 81.3 147 34.0
MBI08_g28970_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.5e-13 80.5 157 30.6
MBI11_g17525_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.5e-13 80.5 140 31.4
MBI02_g26436_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.3e-13 80.1 156 33.3
MBI18_g38834_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.3e-13 80.1 156 33.3
Sabra04G0097800 Salix brachista HOM05D000004 ORTHO05D000002 5.6e-13 79.3 133 41.4
MBI17_g24633_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 7.3e-13 79.0 150 31.3
MBI11_g42074_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.6e-13 78.6 155 29.0
MBI11_g08228_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 3.6e-12 76.6 155 29.0
Nn2g15063 Nelumbo nucifera HOM05D000101 ORTHO05D003282 3.6e-12 76.6 152 33.6
Sabra16G0085200 Salix brachista HOM05D000482 ORTHO05D000349 3.6e-12 76.6 128 44.5
MBI02_g29701_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.2e-12 75.9 157 28.0
Sabra17G0030900 Salix brachista HOM05D001103 ORTHO05D000002 5.3e-11 72.8 157 35.7
Hma1.2p1_1051F.1_g252060 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.2e-10 71.6 165 29.1
MBI11_g16613_MAGBIO Magnolia biondii HOM05D022960 ORTHO05D013107 1.2e-10 71.6 116 31.9
Sabra15G0070300 Salix brachista HOM05D000004 ORTHO05D000002 1.2e-10 71.6 157 35.0
Dinv31613 Davidia involucrata HOM05D000101 ORTHO05D003282 1.5e-10 71.2 79 46.8
Sabra11G0133300 Salix brachista HOM05D000004 ORTHO05D000002 2.6e-10 70.5 115 38.3
MBI01_g16592_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.4e-10 70.1 113 29.2
Atru.chr11.824 Acer truncatum HOM05D010229 ORTHO05D012533 5.8e-10 69.3 127 33.1
Nn3g16447 Nelumbo nucifera HOM05D000101 ORTHO05D000089 5.8e-10 69.3 104 36.5
QL10p054773 Quercus lobata HOM05D000101 ORTHO05D003282 9.9e-10 68.6 162 26.5
MBI18_g26657_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D013107 1.3e-09 68.2 129 29.5
Atru.chr6.119 Acer truncatum HOM05D000004 ORTHO05D000002 2.2e-09 67.4 125 36.0
MBI02_g29699_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.2e-09 67.4 145 27.6
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 2.9e-09 67.0 164 32.9
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.9e-09 66.2 165 27.9
EL10Ac3g06069 Beta vulgaris HOM05D000101 ORTHO05D003282 6.4e-09 65.9 146 28.1
MBI11_g07626_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.4e-09 65.9 122 29.5
MBI11_g12662_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D013107 6.4e-09 65.9 131 27.5
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 1.1e-08 65.1 161 31.7
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 1.1e-08 65.1 161 31.7
CSS0011618 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 1.1e-08 65.1 166 28.9
MBI05_g36586_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.1e-08 65.1 134 31.3
Sabra04G0014900 Salix brachista HOM05D010229 ORTHO05D012533 1.1e-08 65.1 73 50.7
Atru.chr1.2265 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-08 64.3 131 35.9
MBI02_g29700_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.9e-08 64.3 158 26.6
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 3.2e-08 63.5 161 31.7
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 3.2e-08 63.5 183 30.6
Aqoxy3G02620 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 4.2e-08 63.2 152 25.7
Ciclev10014088m.g Citrus clementina HOM05D000092 ORTHO05D000042 4.2e-08 63.2 186 27.4
MBI11_g40803_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.2e-08 63.2 126 28.6
MBI11_g46743_MAGBIO Magnolia biondii HOM05D022960 ORTHO05D013107 7.1e-08 62.4 101 30.7
Ciclev10017820m.g Citrus clementina HOM05D000092 ORTHO05D000042 9.3e-08 62.0 141 29.8
Ciclev10024882m.g Citrus clementina HOM05D000101 ORTHO05D000089 9.3e-08 62.0 128 29.7
Dinv05214 Davidia involucrata HOM05D000101 ORTHO05D000089 9.3e-08 62.0 161 27.3
TAR344G0004 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.1e-07 60.8 137 34.3
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 2.7e-07 60.5 161 31.1
TAR624G1246 Trochodendron aralioides HOM05D000101 ORTHO05D000089 2.7e-07 60.5 120 30.8
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 4.6e-07 59.7 120 36.7
Sabra04G0074700 Salix brachista HOM05D028484 ORTHO05D050754 4.6e-07 59.7 51 54.9
MBI02_g10556_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.0e-07 59.3 160 28.1
MBI02_g10557_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.0e-07 59.3 122 31.1
ATR1120G012 Amborella trichopoda HOM05D000092 ORTHO05D000089 7.9e-07 58.9 165 27.9
MBI01_g35899_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 7.9e-07 58.9 141 24.8
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 7.9e-07 58.9 134 31.3
Sabra16G0244800 Salix brachista HOM05D000004 ORTHO05D000002 7.9e-07 58.9 132 34.8
Medtr4g091380 Medicago truncatula HOM05D000101 ORTHO05D000089 1.0e-06 58.5 142 28.9
ECA247G0472 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 58.2 136 31.6
Eucgr.G00160 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.3e-06 58.2 136 30.1
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 1.3e-06 58.2 171 27.5
QL12p023642 Quercus lobata HOM05D000101 ORTHO05D000089 1.3e-06 58.2 163 26.4
Sabra04G0088500 Salix brachista HOM05D010229 ORTHO05D012533 1.3e-06 58.2 71 45.1
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 1.3e-06 58.2 130 35.4
Gohir.D05G372950 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.8e-06 57.8 151 25.8
TPR.G23161 Trifolium pratense HOM05D008382 ORTHO05D000002 1.8e-06 57.8 115 36.5
TAR243G0002 Trochodendron aralioides HOM05D000092 ORTHO05D000042 2.3e-06 57.4 142 26.8
Ciclev10018190m.g Citrus clementina HOM05D000092 ORTHO05D000042 3.0e-06 57.0 186 25.8
Eucgr.L01792 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.9e-06 56.6 169 26.0
Prupe.1G542800 Prunus persica HOM05D000092 ORTHO05D000042 5.1e-06 56.2 138 23.9
RcHm_v2.0_Chr6g0256601 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 56.2 138 26.1
Thecc.06G071400 Theobroma cacao HOM05D000101 ORTHO05D000089 5.1e-06 56.2 152 28.3
Atru.chr10.1188 Acer truncatum HOM05D000101 ORTHO05D000089 6.7e-06 55.8 112 29.5
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 6.7e-06 55.8 172 29.1
Duzib268G0022 Durio zibethinus HOM05D000101 ORTHO05D000089 8.7e-06 55.5 157 26.1


User provided reference genes

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