Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0149500 Rhododendron simsii HOM05D001567 ORTHO05D001409 1.4e-79 299.7 161 100.0
vmacro03659 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 3.4e-30 135.6 142 55.6
Actinidia02333 Actinidia chinensis HOM05D001567 ORTHO05D001409 2.4e-23 112.8 143 49.7
CSS0012763 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 1.2e-22 110.5 137 46.0
Oeu007157.1 Olea europaea HOM05D001567 ORTHO05D001409 2.2e-21 106.3 167 43.1
Cpa.g.c45104 Carica papaya HOM05D001567 ORTHO05D001409 1.6e-19 100.1 155 40.0
Thecc.06G229600 Theobroma cacao HOM05D001567 ORTHO05D001409 8.8e-18 94.4 157 40.1
Cfa000139 Carpinus fangiana HOM05D001567 ORTHO05D001409 2.2e-16 89.7 168 39.3
RcHm_v2.0_Chr5g0001841 Rosa chinensis HOM05D001567 ORTHO05D001409 2.2e-16 89.7 142 37.3
Migut.M01364 Erythranthe guttata HOM05D001567 ORTHO05D001409 6.3e-16 88.2 149 39.6
TAR629G0424 Trochodendron aralioides HOM05D001567 ORTHO05D001409 8.2e-16 87.8 151 40.4
Haze_06885 Corylus avellana HOM05D001567 ORTHO05D001409 1.1e-15 87.4 162 38.9
Dinv20114 Davidia involucrata HOM05D001567 ORTHO05D001409 1.4e-15 87.0 169 35.5
Manes.17G022526 Manihot esculenta HOM05D001567 ORTHO05D001409 3.1e-15 85.9 159 40.3
Peaxi162Scf00521g00072 Petunia axillaris HOM05D001567 ORTHO05D001409 3.1e-15 85.9 163 44.8
FAN21G3527 Fragaria x ananassa HOM05D001567 ORTHO05D001409 4.1e-15 85.5 143 36.4
Hma1.2p1_0660F.1_g197410 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 4.1e-15 85.5 102 53.9
Nitab4.5_0004821g0030 Nicotiana tabacum HOM05D001567 ORTHO05D001409 5.3e-15 85.1 136 39.0
Prupe.4G013900 Prunus persica HOM05D001567 ORTHO05D001409 6.9e-15 84.7 158 37.3
Gohir.A05G174000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 9.1e-15 84.3 152 36.8
Peaxi162Scf01096g00011 Petunia axillaris HOM05D001567 ORTHO05D001409 1.2e-14 84.0 128 43.0
Duzib235G0464 Durio zibethinus HOM05D001567 ORTHO05D001409 1.5e-14 83.6 137 38.7
Hma1.2p1_2753F.1_g327910 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 1.5e-14 83.6 102 52.9
Gorai.009G182400 Gossypium raimondii HOM05D001567 ORTHO05D001409 3.4e-14 82.4 152 36.8
CsaV3_6G048640 Cucumis sativus L. HOM05D001567 ORTHO05D001409 4.5e-14 82.0 155 36.8
FvH4_3g01290 Fragaria vesca HOM05D001567 ORTHO05D001409 4.5e-14 82.0 143 35.0
FAN25G3753 Fragaria x ananassa HOM05D001567 ORTHO05D001409 4.5e-14 82.0 137 35.0
Nn1g03375 Nelumbo nucifera HOM05D001567 ORTHO05D001409 4.5e-14 82.0 184 36.4
Nitab4.5_0009515g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 4.5e-14 82.0 136 40.4
Lj6g0015850 Lotus japonicus HOM05D001567 ORTHO05D001409 5.9e-14 81.6 152 36.8
Nn1g07302 Nelumbo nucifera HOM05D001567 ORTHO05D001409 5.9e-14 81.6 155 37.4
PGR042G3932 Punica granatum HOM05D001567 ORTHO05D001409 7.7e-14 81.3 156 37.8
MD10G1328000 Malus domestica HOM05D001567 ORTHO05D001409 1.3e-13 80.5 143 38.5
Gohir.D05G177000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 2.2e-13 79.7 152 36.2
Nitab4.5_0002613g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 2.2e-13 79.7 158 38.0
QL03p008070 Quercus lobata HOM05D001567 ORTHO05D001409 2.2e-13 79.7 152 36.8
VMungo0540G0409 Vigna mungo HOM05D001567 ORTHO05D001409 2.2e-13 79.7 141 36.2
Hma1.2p1_0298F.1_g117420 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 2.9e-13 79.3 104 47.1
COL.COLO4_31845 Corchorus olitorius HOM05D001567 ORTHO05D001409 5.0e-13 78.6 155 36.8
Glyma.07G264100 Glycine max HOM05D001567 ORTHO05D001409 5.0e-13 78.6 146 39.0
Lj4g0027518 Lotus japonicus HOM05D001567 ORTHO05D001409 5.0e-13 78.6 149 36.2
PGSC0003DMG400024061 Solanum tuberosum HOM05D001567 ORTHO05D001409 5.0e-13 78.6 128 43.0
Ciclev10017636m.g Citrus clementina HOM05D001567 ORTHO05D001409 6.5e-13 78.2 168 37.5
Cc09_g01120 Coffea canephora HOM05D001567 ORTHO05D001409 6.5e-13 78.2 138 39.1
MELO3C007424.2 Cucumis melo HOM05D001567 ORTHO05D001409 6.5e-13 78.2 164 36.0
Nitab4.5_0000091g0430 Nicotiana tabacum HOM05D001567 ORTHO05D001409 6.5e-13 78.2 160 37.5
Duzib192G0402 Durio zibethinus HOM05D001567 ORTHO05D001409 8.5e-13 77.8 144 36.1
MBI19_g03674_MAGBIO Magnolia biondii HOM05D001567 ORTHO05D001409 8.5e-13 77.8 155 32.9
MD05G1353900 Malus domestica HOM05D001567 ORTHO05D001409 8.5e-13 77.8 151 37.7
QL05p070193 Quercus lobata HOM05D001567 ORTHO05D001409 1.4e-12 77.0 152 36.2
CANSAT56G0685 Cannabis sativa HOM05D001567 ORTHO05D001409 1.9e-12 76.6 167 32.9
CANSAT56G1550 Cannabis sativa HOM05D001567 ORTHO05D001409 1.9e-12 76.6 167 32.9
CAN.G404.5 Capsicum annuum HOM05D000114 ORTHO05D005904 1.9e-12 76.6 113 38.9
ClCG01G021600 Citrullus lanatus HOM05D001567 ORTHO05D001409 2.5e-12 76.3 158 34.8
MSTRG.7186 Avicennia marina HOM05D001567 ORTHO05D001409 3.2e-12 75.9 159 39.6
Gorai.010G184800 Gossypium raimondii HOM05D001567 ORTHO05D001409 3.2e-12 75.9 144 35.4
DCAR_002207 Daucus carota HOM05D001567 ORTHO05D001409 4.2e-12 75.5 142 38.7
TAR020G0004 Trochodendron aralioides HOM05D001567 ORTHO05D001409 7.2e-12 74.7 151 34.4
CiPaw.10G075300 Carya illinoinensis HOM05D001567 ORTHO05D001409 1.2e-11 73.9 154 34.4
SGA_v2.0_scaffold7G03788 Striga asiatica HOM05D001567 ORTHO05D001409 1.2e-11 73.9 102 42.2
Solyc02g081180.2 Solanum lycopersicum HOM05D001567 ORTHO05D001409 2.1e-11 73.2 140 40.7
Solyc03g031830.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 2.1e-11 73.2 97 46.4
TAR626G0005 Trochodendron aralioides HOM05D001567 ORTHO05D001409 2.1e-11 73.2 153 34.0
Glyma.09G008200 Glycine max HOM05D001567 ORTHO05D001409 2.7e-11 72.8 133 36.8
Sopen03g005690 Solanum pennellii HOM05D001567 ORTHO05D001409 2.7e-11 72.8 97 46.4
Gohir.D06G158300 Gossypium hirsutum HOM05D001567 ORTHO05D001409 3.6e-11 72.4 152 33.6
Potri.004G003101 Populus trichocarpa HOM05D001567 ORTHO05D001409 3.6e-11 72.4 158 37.3
Sabra04G0001700 Salix brachista HOM05D001567 ORTHO05D001409 3.6e-11 72.4 137 39.4
Sopen02g025820 Solanum pennellii HOM05D001567 ORTHO05D001409 4.7e-11 72.0 106 46.2
Eucgr.E03980 Eucalyptus grandis HOM05D001567 ORTHO05D001409 1.0e-10 70.9 152 34.9
Phvul.006G145000 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 1.0e-10 70.9 136 34.6
Psat1g177600 Pisum sativum HOM05D001567 ORTHO05D001409 1.4e-10 70.5 144 36.1
PGSC0003DMG400016713 Solanum tuberosum HOM05D001567 ORTHO05D001409 2.3e-10 69.7 152 39.5
VMungo1215G2300 Vigna mungo HOM05D001567 ORTHO05D001409 2.3e-10 69.7 100 43.0
THA.LOC104813470 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 6.7e-10 68.2 133 35.3
Glyma.15G112600 Glycine max HOM05D001567 ORTHO05D001409 8.8e-10 67.8 141 36.9
Lalb_Chr18g0056821 Lupinus albus HOM05D001567 ORTHO05D001409 1.1e-09 67.4 104 40.4
Medtr2g025080 Medicago truncatula HOM05D001567 ORTHO05D001409 4.4e-09 65.5 137 38.7
TWI63G1699 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 7.4e-09 64.7 175 33.7
Lalb_Chr15g0087831 Lupinus albus HOM05D001567 ORTHO05D001409 9.7e-09 64.3 150 35.3
Ca_21058_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 1.3e-08 63.9 145 33.8
Glyma.17G009900 Glycine max HOM05D001567 ORTHO05D001409 1.7e-08 63.5 145 33.8
Thhalv10029329m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 2.8e-08 62.8 143 34.3
AT4G03965 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 6.3e-08 61.6 131 32.8
Gohir.A06G152000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 6.3e-08 61.6 89 40.4
Oeu051875.1 Olea europaea HOM05D000787 ORTHO05D001409 6.3e-08 61.6 225 28.0
Sed0020262 Sechium edule HOM05D001567 ORTHO05D001409 6.3e-08 61.6 135 35.6
CSS0015197 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 8.2e-08 61.2 97 41.2
Carub.0006s3204 Capsella rubella HOM05D001567 ORTHO05D001409 8.2e-08 61.2 131 35.1
CSS0047477 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 1.1e-07 60.8 97 41.2
CARHR253430 Cardamine hirsuta HOM05D001567 ORTHO05D001409 1.1e-07 60.8 131 34.4
Rhsim04G0137900 Rhododendron simsii HOM05D044478 ORTHO05D038081 1.4e-07 60.5 47 72.3
arahy.Tifrunner.gnm1.ann1.IL02F1 Arachis hypogaea HOM05D001567 ORTHO05D001409 1.8e-07 60.1 145 33.1
arahy.Tifrunner.gnm1.ann1.KST8W5 Arachis hypogaea HOM05D001567 ORTHO05D001409 1.8e-07 60.1 145 33.8
HanXRQChr15g0470761 Helianthus annuus HOM05D001567 ORTHO05D001409 1.8e-07 60.1 135 36.3
AL6G47750 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 2.4e-07 59.7 129 32.6
Dinv39751 Davidia involucrata HOM05D001567 ORTHO05D001409 2.4e-07 59.7 107 42.1
PSO675G9389 Papaver somniferum HOM05D001567 ORTHO05D001409 3.1e-07 59.3 137 32.8
Phvul.003G082200 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 4.1e-07 58.9 100 37.0
PSO541G3517 Papaver somniferum HOM05D001567 ORTHO05D001409 7.0e-07 58.2 138 31.9
Actinidia10798 Actinidia chinensis HOM05D001567 ORTHO05D001409 9.1e-07 57.8 99 39.4
Duzib211G0626 Durio zibethinus HOM05D001567 ORTHO05D001409 9.1e-07 57.8 109 37.6
Ca_00700_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 2.0e-06 56.6 161 34.8
Ah.09g234460 Amaranthus hybridus HOM05D001567 ORTHO05D001409 2.6e-06 56.2 169 36.7
HanXRQChr16g0516871 Helianthus annuus HOM05D001567 ORTHO05D001409 2.6e-06 56.2 155 34.2
Atru.chr10.2316 Acer truncatum HOM05D001567 ORTHO05D001409 3.5e-06 55.8 117 34.2
Sed0027499 Sechium edule HOM05D001567 ORTHO05D001409 3.5e-06 55.8 91 38.5
Aqoxy1G04181 Aquilegia oxysepala HOM05D001567 ORTHO05D001409 4.5e-06 55.5 103 32.0
Duzib138G0709 Durio zibethinus HOM05D001567 ORTHO05D001409 4.5e-06 55.5 108 39.8


User provided reference genes

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