Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 5.4e-97 357.8 204 100.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.2e-67 260.4 204 77.9
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 1.3e-61 240.4 139 89.9
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.1e-60 235.7 134 88.8
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 3.5e-56 222.2 147 79.6
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 1.0e-55 220.7 214 62.1
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 3.0e-55 219.2 209 65.1
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 5.1e-55 218.4 210 69.0
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 5.1e-55 218.4 210 69.0
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-54 217.2 202 64.9
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 3.3e-54 215.7 197 62.9
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 3.3e-54 215.7 210 61.4
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 9.6e-54 214.2 205 63.9
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 2.8e-53 212.6 149 74.5
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.7e-53 212.2 142 79.6
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 4.8e-53 211.8 212 59.0
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 4.8e-53 211.8 204 61.8
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 8.1e-53 211.1 141 79.4
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.8e-52 209.9 139 76.3
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.8e-52 209.9 207 62.8
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 5.3e-52 208.4 134 77.6
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 6.9e-52 208.0 182 63.7
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 6.9e-52 208.0 146 74.7
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-51 206.8 153 72.5
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.6e-51 206.1 140 75.7
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 3.4e-51 205.7 135 77.8
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 4.5e-51 205.3 204 64.2
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 5.8e-51 204.9 202 60.4
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.0e-50 204.1 155 67.7
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.0e-50 204.1 196 64.3
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 2.9e-50 202.6 147 74.8
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 4.9e-50 201.8 147 74.8
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 4.9e-50 201.8 134 77.6
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 8.4e-50 201.1 162 67.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 1.1e-49 200.7 207 62.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.4e-49 200.3 212 65.1
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.5e-49 199.5 176 65.3
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 3.2e-49 199.1 148 73.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 3.2e-49 199.1 144 73.6
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.2e-49 199.1 150 70.0
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 3.2e-49 199.1 202 59.9
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 7.1e-49 198.0 131 76.3
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 9.3e-49 197.6 147 72.8
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.2e-48 197.2 135 76.3
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.6e-48 196.8 140 75.0
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.6e-48 196.8 144 72.2
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.1e-48 196.4 145 71.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 4.6e-48 195.3 226 61.1
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.0e-48 194.9 206 61.7
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.3e-47 193.0 153 66.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 2.3e-47 193.0 133 72.9
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 3.0e-47 192.6 145 71.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 6.7e-47 191.4 203 59.1
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 8.7e-47 191.0 133 73.7
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-46 190.7 215 60.0
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.9e-46 189.9 206 60.2
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.3e-46 189.1 214 59.8
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 3.3e-46 189.1 152 65.8
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 9.6e-46 187.6 216 59.3
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.1e-45 186.4 215 59.1
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 4.8e-45 185.3 216 56.9
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 8.2e-45 184.5 221 54.3
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 8.2e-45 184.5 131 72.5
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.8e-44 183.3 131 74.0
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 3.1e-44 182.6 131 69.5
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.3e-44 181.8 153 64.7
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 5.3e-44 181.8 134 73.9
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.2e-43 180.6 135 67.4
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.5e-43 180.3 134 70.1
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 2.2e-42 176.4 131 67.9
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 2.9e-42 176.0 208 51.9
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-41 173.7 135 65.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.9e-41 173.3 152 61.8
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 2.5e-41 172.9 150 62.0
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.5e-41 172.9 146 63.0
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.5e-41 172.9 144 64.6
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 3.2e-41 172.6 204 52.9
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.5e-41 171.8 192 50.5
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 5.5e-41 171.8 202 55.9
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 5.5e-41 171.8 212 57.1
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 7.2e-41 171.4 206 52.9
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 7.2e-41 171.4 135 65.9
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.2e-40 170.6 137 63.5
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.6e-40 170.2 126 67.5
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 6.1e-40 168.3 146 61.0
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 6.1e-40 168.3 148 63.5
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 7.9e-40 167.9 207 53.6
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 7.9e-40 167.9 138 63.0
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.0e-39 167.5 221 49.3
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.3e-39 167.2 148 62.8
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-39 166.8 151 58.9
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 3.0e-39 166.0 203 57.6
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 5.1e-39 165.2 151 57.6
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 5.1e-39 165.2 151 57.6
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.7e-39 164.9 150 59.3
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.1e-38 164.1 203 52.7
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-38 164.1 151 57.0
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 1.5e-38 163.7 194 53.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-38 163.7 194 53.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 1.5e-38 163.7 194 53.6
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 1.9e-38 163.3 150 57.3
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.3e-38 162.5 135 62.2
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 7.4e-38 161.4 202 54.0
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.3e-37 160.6 130 67.7
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 3.7e-37 159.1 150 55.3
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 4.8e-37 158.7 185 56.8
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.1e-36 156.0 131 62.6
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.1e-36 155.6 144 57.6
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 5.0e-34 148.7 189 53.4
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 6.5e-34 148.3 152 56.6
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-33 147.5 103 73.8
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 9.4e-33 144.4 135 61.5
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-31 140.2 156 52.6
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-31 140.2 156 52.6
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 2.3e-31 139.8 164 53.0
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.0e-31 139.4 164 52.4
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 6.7e-31 138.3 156 52.6
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.7e-31 138.3 138 53.6
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.1e-30 137.5 164 52.4
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 9.7e-30 134.4 206 43.7
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-29 133.3 207 44.0
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-29 133.3 207 44.0
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 2.2e-29 133.3 207 44.0
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 6.3e-29 131.7 205 46.3
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 6.3e-29 131.7 205 46.3
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 8.2e-29 131.3 200 45.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 8.2e-29 131.3 155 51.6
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.0e-26 124.4 150 52.0
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 3.8e-26 122.5 132 56.8
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.5e-26 121.7 98 66.3
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 1.4e-25 120.6 150 52.0
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 7.9e-24 114.8 114 55.3
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 3.9e-23 112.5 100 65.0
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.5e-22 110.5 141 50.4
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 2.6e-22 109.8 138 49.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 1.3e-21 107.5 200 42.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.5e-17 94.0 67 73.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.9e-09 67.0 183 33.3
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.6e-08 63.9 60 63.3
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 2.0e-06 57.0 58 48.3


User provided reference genes

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