Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-190 667.5 358 100.0
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.1e-135 485.0 437 67.0
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-125 451.8 437 63.6
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-124 449.9 437 63.4
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.4e-118 428.7 437 61.3
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 5.7e-110 401.7 384 61.7
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.2e-109 399.8 399 63.2
Rhsim09G0046000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-69 267.3 234 63.7
Rhsim03G0174200 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-49 198.7 211 55.9
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-45 187.6 330 38.8
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.5e-38 162.9 336 34.2
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.2e-36 156.8 397 31.2
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-34 149.4 398 30.7
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.6e-30 135.6 213 37.1
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-24 118.2 249 30.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-21 107.8 223 25.6
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.9e-19 99.0 242 26.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-18 97.1 128 36.7
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-18 96.3 128 35.2
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-18 96.3 108 40.7
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-18 95.9 128 35.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-18 95.9 128 35.9
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-18 95.9 128 35.9
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-17 95.1 128 35.9
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-17 95.1 128 35.9
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-17 94.4 133 33.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-17 94.4 133 33.8
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.3e-17 93.6 141 29.8
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-17 93.2 133 33.1
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-17 92.8 128 33.6
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-17 92.8 128 33.6
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-17 92.8 128 33.6
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-16 91.7 128 33.6
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.7e-16 91.3 141 29.1
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.7e-16 91.3 126 34.1
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.8e-16 90.5 141 29.8
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 4.8e-16 89.7 145 35.9
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.9e-15 85.9 128 32.8
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-14 84.7 143 30.1
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-14 83.6 133 31.6
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.9e-14 82.8 134 32.1
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.7e-13 81.3 129 31.0
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.2e-13 80.9 213 27.2
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.2e-13 80.9 128 35.2
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.8e-13 80.1 131 34.4
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 5.0e-13 79.7 129 38.0
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.5e-13 79.3 152 30.3
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.1e-12 78.6 129 29.5
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.1e-12 78.6 123 33.3
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.4e-12 78.2 292 20.2
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-12 78.2 134 30.6
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-12 77.8 130 31.5
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-12 77.0 120 32.5
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.2e-12 76.6 292 20.2
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.5e-12 76.3 146 30.1
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.2e-12 75.9 274 22.3
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.4e-12 75.5 130 30.0
Rhsim08G0004600 Rhododendron simsii HOM05D007376 ORTHO05D338607 3.6e-11 73.6 199 23.6
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 1.4e-10 71.6 125 30.4
Rhsim10G0001000 Rhododendron simsii HOM05D011841 ORTHO05D001590 1.8e-10 71.2 82 69.5
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.3e-10 70.9 129 27.9
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.3e-10 70.9 300 21.3
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.1e-10 69.7 107 33.6
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-10 69.3 217 22.6
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-10 69.3 107 35.5
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.7e-10 69.3 132 31.8
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 1.1e-09 68.6 100 34.0
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 4.4e-09 66.6 71 42.3
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 4.4e-09 66.6 71 42.3
Rhsim04G0140700 Rhododendron simsii HOM05D011841 ORTHO05D001590 4.4e-09 66.6 80 67.5
Rhsim04G0141300 Rhododendron simsii HOM05D011841 ORTHO05D001590 4.4e-09 66.6 80 67.5
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 7.4e-09 65.9 67 43.3
FvH4_3g38842 Fragaria vesca HOM05D001313 ORTHO05D008319 7.4e-09 65.9 103 35.9
Rhsim05G0049300 Rhododendron simsii HOM05D011841 ORTHO05D001590 7.4e-09 65.9 72 76.4
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.3e-08 62.8 231 22.9
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.2e-08 62.4 218 21.6
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-07 62.0 206 24.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-07 62.0 231 22.9
FAN24G3391 Fragaria x ananassa HOM05D001313 ORTHO05D008319 1.1e-07 62.0 103 34.0
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 5.3e-07 59.7 176 24.4
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.1e-07 58.9 148 23.6
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 9.1e-07 58.9 89 31.5
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.2e-06 58.5 114 32.5
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-06 58.5 111 28.8
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-06 58.5 111 28.8
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.2e-06 58.5 111 28.8
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.2e-06 58.5 183 23.5
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 2.0e-06 57.8 135 21.5
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.5e-06 56.6 95 26.3
Rhsim11G0077700 Rhododendron simsii HOM05D011841 ORTHO05D001590 5.9e-06 56.2 82 63.4
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 5.9e-06 56.2 129 25.6
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 5.9e-06 56.2 99 30.3


User provided reference genes

Program Settings