Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 3.8e-128 461.5 225 100.0
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 8.6e-96 354.0 243 75.3
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.3e-91 340.1 227 72.7
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 3.7e-91 338.6 227 73.1
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 1.3e-83 313.5 221 65.6
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.4e-82 310.1 219 66.7
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.9e-82 309.7 222 65.3
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 3.2e-82 308.9 219 64.8
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 4.1e-82 308.5 219 64.4
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.6e-81 306.6 221 63.8
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 2.1e-81 306.2 221 63.8
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 6.0e-81 304.7 220 62.7
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 3.0e-80 302.4 221 64.3
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 2.5e-79 299.3 224 61.6
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 3.6e-78 295.4 219 62.1
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 4.7e-78 295.0 221 61.5
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.0e-77 292.0 222 61.3
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.2e-77 291.6 222 60.8
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 5.2e-77 291.6 221 62.0
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 6.8e-77 291.2 216 63.9
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.9e-77 290.8 222 60.8
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.0e-76 289.7 222 60.4
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 2.6e-76 289.3 218 62.4
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 5.8e-76 288.1 221 62.9
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.6e-76 287.7 222 60.4
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.3e-75 287.0 218 63.8
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.3e-75 287.0 221 62.9
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.2e-75 286.2 218 62.8
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.2e-75 286.2 219 58.0
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 4.1e-74 282.0 224 61.6
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 7.1e-74 281.2 221 58.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 9.2e-74 280.8 216 62.0
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 9.2e-74 280.8 222 61.7
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.6e-73 280.0 221 58.4
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.6e-73 280.0 213 63.4
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.6e-73 280.0 219 57.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.7e-73 279.3 223 59.6
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 3.5e-73 278.9 208 64.9
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 3.5e-73 278.9 223 58.3
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.7e-72 276.6 222 59.9
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 3.0e-72 275.8 221 59.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.9e-72 275.4 221 60.6
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 4.3e-71 271.9 221 59.7
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.6e-71 271.6 221 60.2
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 2.8e-70 269.2 223 57.4
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 4.7e-70 268.5 222 58.6
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 4.7e-70 268.5 224 57.6
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 8.1e-70 267.7 222 58.6
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 8.1e-70 267.7 221 58.4
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.1e-69 267.3 222 55.9
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.8e-69 266.5 225 57.3
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.2e-68 263.8 203 62.6
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.6e-68 262.7 224 58.0
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 4.4e-68 261.9 224 55.4
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 5.8e-68 261.5 229 51.5
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.8e-67 258.8 218 57.3
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 6.4e-67 258.1 227 55.5
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 3.2e-66 255.8 174 67.8
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.6e-65 253.4 218 55.0
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 2.7e-65 252.7 218 56.0
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.0e-64 250.8 224 54.5
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 5.1e-64 248.4 219 53.9
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 6.6e-64 248.1 224 53.6
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 6.6e-64 248.1 223 52.9
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 4.3e-63 245.4 230 53.0
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 3.1e-61 239.2 222 52.3
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 4.0e-61 238.8 157 70.1
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.4e-60 235.7 223 55.2
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.2e-59 233.0 222 50.5
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.2e-59 233.0 222 50.0
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.9e-59 231.9 219 45.7
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 4.2e-58 228.8 218 48.6
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 9.3e-58 227.6 235 47.7
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 5.1e-56 221.9 204 52.5
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.1e-55 220.7 212 50.0
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.9e-55 219.9 158 68.4
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 3.6e-54 215.7 221 48.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 6.9e-53 211.5 235 46.8
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.9e-53 211.5 219 44.3
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.2e-52 210.7 221 46.2
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 3.2e-50 202.6 220 43.2
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 2.3e-48 196.4 160 58.1
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 9.6e-47 191.0 168 54.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.5e-36 157.1 96 75.0
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 8.7e-32 141.4 138 52.2
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 7.4e-31 138.3 168 42.3
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 4.8e-30 135.6 131 52.7
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 8.2e-22 108.2 78 60.3
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 8.5e-19 98.2 170 32.9
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.1e-18 97.8 89 44.9
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.1e-07 61.2 218 24.8
SEGI_24243 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 8.2e-06 55.1 210 21.9


User provided reference genes

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