Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0112400 Rhododendron simsii HOM05D020730 ORTHO05D009693 4.4e-44 181.0 100 100.0
CSS0048375 Camellia sinensis var. sinensis HOM05D020730 ORTHO05D009693 7.1e-18 94.0 105 58.1
Actinidia37078 Actinidia chinensis HOM05D020730 ORTHO05D009693 5.1e-16 87.8 104 54.8
Hma1.2p1_3516F.1_g336516 Hydrangea macrophylla HOM05D020730 ORTHO05D009693 1.0e-11 73.6 73 56.2
Dinv42544 Davidia involucrata HOM05D020730 ORTHO05D009693 9.3e-10 67.0 76 53.9
Glyma.13G154500 Glycine max HOM05D007825 ORTHO05D009693 6.7e-08 60.8 74 45.9
Dinv31697 Davidia involucrata HOM05D007825 ORTHO05D009693 8.7e-08 60.5 73 46.6
Cc01_g09030 Coffea canephora HOM05D020730 ORTHO05D009693 3.3e-07 58.5 90 47.8
Rhsim03G0074400 Rhododendron simsii HOM05D001257 ORTHO05D007181 4.3e-07 58.2 73 47.9
Thecc.05G090800 Theobroma cacao HOM05D007825 ORTHO05D009693 5.7e-07 57.8 74 45.9
Actinidia07924 Actinidia chinensis HOM05D001354 ORTHO05D007486 7.4e-07 57.4 79 43.0
GSVIVG01033861001 Vitis vinifera HOM05D007825 ORTHO05D009693 9.6e-07 57.0 74 41.9
Glyma.09G026600 Glycine max HOM05D007825 ORTHO05D009693 2.1e-06 55.8 77 41.6
Nn2g14176 Nelumbo nucifera HOM05D007825 ORTHO05D009693 3.7e-06 55.1 81 45.7
Sp5g09670 Schrenkiella parvula HOM05D007825 ORTHO05D009693 3.7e-06 55.1 75 45.3
Lalb_Chr02g0154901 Lupinus albus HOM05D007825 ORTHO05D009693 4.8e-06 54.7 71 45.1
Duzib093G1765 Durio zibethinus HOM05D007825 ORTHO05D009693 6.2e-06 54.3 76 43.4
Solyc09g009930.2 Solanum lycopersicum HOM05D007825 ORTHO05D009693 6.2e-06 54.3 78 43.6
Sopen09g004680 Solanum pennellii HOM05D007825 ORTHO05D009693 6.2e-06 54.3 78 43.6
Ca_00897_v3 Cicer arietinum L. HOM05D007825 ORTHO05D009693 8.2e-06 53.9 77 42.9
THA.LOC104799760 Tarenaya hassleriana HOM05D007825 ORTHO05D009693 8.2e-06 53.9 76 43.4


User provided reference genes

Program Settings