Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 5.9e-204 714.1 342 100.0
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.7e-182 641.7 341 90.0
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.0e-171 607.1 341 83.3
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.0e-171 607.1 341 83.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.7e-163 579.7 337 83.1
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 7.4e-154 547.7 340 77.9
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.6e-145 520.0 334 74.0
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 2.8e-145 519.2 331 74.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 8.2e-145 517.7 341 71.6
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.4e-144 516.9 333 73.9
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 3.1e-144 515.8 342 71.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 9.0e-144 514.2 336 73.2
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 9.0e-144 514.2 342 71.9
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.2e-143 513.8 333 73.6
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 2.0e-143 513.1 335 73.4
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 3.4e-143 512.3 338 72.5
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 4.5e-143 511.9 333 73.3
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.0e-142 510.8 338 72.5
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 2.9e-142 509.2 325 72.6
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 4.9e-142 508.4 325 74.5
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.1e-141 507.3 332 72.0
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.1e-141 507.3 339 72.0
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.9e-141 506.5 336 72.3
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.5e-141 506.1 344 72.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 5.5e-141 505.0 333 72.7
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 7.1e-141 504.6 340 69.7
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 9.3e-141 504.2 349 70.8
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.7e-140 502.7 332 72.9
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 6.1e-140 501.5 337 69.7
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.3e-139 500.4 341 70.1
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.3e-139 500.4 336 69.6
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.3e-139 500.4 330 73.0
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.3e-139 499.6 334 72.2
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 3.9e-139 498.8 325 72.3
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 5.1e-139 498.4 334 69.2
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 6.7e-139 498.0 325 71.4
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 8.7e-139 497.7 333 72.1
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.5e-138 496.9 342 69.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.5e-138 496.9 325 71.1
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.3e-138 495.4 329 71.7
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.3e-138 495.4 324 71.9
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 5.7e-138 495.0 330 72.4
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 9.7e-138 494.2 323 74.0
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 2.2e-137 493.0 334 70.4
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.2e-137 493.0 333 68.5
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 3.7e-137 492.3 341 70.7
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 3.7e-137 492.3 333 70.9
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.1e-136 490.7 315 73.7
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.4e-136 490.3 333 70.0
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.8e-136 490.0 326 72.4
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.8e-136 490.0 328 72.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.4e-136 489.6 326 70.2
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 4.1e-136 488.8 326 70.2
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 5.3e-136 488.4 329 69.6
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 9.0e-136 487.6 314 72.9
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 9.0e-136 487.6 333 70.0
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.2e-135 487.3 342 68.1
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 2.0e-135 486.5 327 71.6
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 4.5e-135 485.3 327 71.3
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.5e-135 485.3 365 64.9
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.9e-135 485.0 357 66.7
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.7e-134 483.4 343 67.9
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.2e-134 483.0 340 68.2
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 6.5e-134 481.5 340 69.4
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.5e-134 481.5 313 73.2
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 8.5e-134 481.1 324 69.4
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 4.2e-133 478.8 335 67.8
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 9.4e-133 477.6 326 68.7
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 9.4e-133 477.6 338 69.2
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.6e-132 476.9 337 68.0
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 6.1e-132 474.9 327 70.6
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 1.4e-131 473.8 338 66.0
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 5.1e-131 471.9 334 66.2
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 2.0e-130 469.9 329 66.3
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 3.3e-130 469.2 334 69.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 4.3e-130 468.8 307 72.6
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.2e-129 466.5 333 67.3
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 2.8e-129 466.1 333 67.0
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.7e-129 465.7 344 65.4
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 4.8e-129 465.3 341 64.8
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 4.8e-129 465.3 339 65.5
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 6.3e-129 464.9 334 65.9
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.1e-128 464.2 332 64.8
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 3.1e-128 462.6 333 65.2
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 4.1e-128 462.2 340 65.3
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 4.1e-128 462.2 340 65.3
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.5e-127 460.3 328 65.5
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.5e-127 460.3 328 65.5
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 2.6e-127 459.5 328 68.6
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 4.5e-127 458.8 340 64.1
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.2e-126 456.4 341 67.7
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 3.6e-124 449.1 437 54.0
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 2.3e-123 446.4 297 68.7
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 3.0e-123 446.0 340 64.4
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.4e-120 437.2 335 63.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 5.0e-118 428.7 291 69.1
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 6.5e-118 428.3 323 66.3
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 8.5e-118 427.9 351 60.4
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 9.7e-106 387.9 311 61.1
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 2.2e-105 386.7 276 69.2
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 4.8e-105 385.6 353 55.5
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.1e-100 370.2 252 70.2
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 6.1e-100 368.6 323 53.9
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.5e-95 352.8 232 75.0
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.7e-94 350.5 347 51.3
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.0e-86 324.7 314 50.6
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.9e-86 322.8 314 50.3
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.2e-39 168.3 99 74.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 6.7e-38 162.5 337 35.9
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 7.4e-37 159.1 94 75.5
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.8e-27 127.9 65 90.8
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 5.8e-26 122.9 139 48.2
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 5.1e-22 109.8 77 62.3
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.1e-19 100.1 272 29.0
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 7.7e-18 95.9 49 89.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 8.5e-17 92.4 67 70.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 2.5e-13 80.9 53 69.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.2e-10 72.0 128 35.2


User provided reference genes

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