Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 2.4e-87 325.5 168 100.0
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 4.8e-67 258.1 207 67.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.1e-66 256.9 170 79.4
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.4e-63 246.5 170 76.5
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 4.2e-63 245.0 171 80.1
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.3e-61 240.0 168 76.8
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.6e-59 233.0 169 72.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.1e-58 230.3 167 71.9
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.4e-58 229.9 170 71.2
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.8e-58 229.6 169 70.4
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.0e-57 226.1 169 66.3
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 5.9e-57 224.6 171 70.8
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 6.5e-56 221.1 160 70.0
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.1e-55 220.3 170 68.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.2e-55 218.8 170 67.1
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 7.2e-55 217.6 169 64.5
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.6e-54 216.5 162 72.8
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.6e-54 216.5 169 66.3
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.7e-54 215.7 170 65.9
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.7e-54 215.7 169 63.9
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 7.9e-54 214.2 169 64.5
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.8e-53 213.0 170 67.1
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.3e-53 212.6 171 63.7
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 3.9e-53 211.8 171 62.0
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 8.8e-53 210.7 154 72.1
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 2.0e-52 209.5 168 63.1
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 4.3e-52 208.4 169 62.1
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 5.7e-52 208.0 176 64.2
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 7.4e-52 207.6 169 64.5
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 9.7e-52 207.2 169 61.5
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 9.7e-52 207.2 169 64.5
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.7e-51 206.5 170 63.5
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.7e-51 206.5 165 62.4
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.8e-51 205.7 159 66.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 4.8e-51 204.9 169 63.9
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 8.2e-51 204.1 160 62.5
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 3.1e-50 202.2 169 59.2
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.1e-50 202.2 160 69.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 4.1e-50 201.8 161 68.3
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 3.4e-49 198.7 159 63.5
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.4e-49 198.7 162 68.5
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 7.7e-49 197.6 167 61.1
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.8e-48 195.3 161 59.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 5.0e-48 194.9 175 58.9
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 5.0e-48 194.9 159 61.6
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 5.0e-48 194.9 169 62.1
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.4e-47 193.4 161 62.7
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 4.2e-47 191.8 167 58.7
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.3e-45 186.0 170 60.6
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.0e-45 185.7 170 60.6
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.3e-43 180.3 167 57.5
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 3.7e-43 178.7 169 59.2
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 8.2e-43 177.6 167 55.7
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.0e-41 172.9 166 52.4
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 3.5e-41 172.2 193 51.8
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 3.5e-41 172.2 168 52.4
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.7e-40 169.9 169 55.0
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.2e-40 169.5 158 56.3
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 2.9e-40 169.1 169 54.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 3.8e-40 168.7 165 53.9
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.8e-40 168.7 164 53.7
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 6.5e-40 167.9 165 53.9
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 6.5e-40 167.9 165 53.9
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 6.5e-40 167.9 158 54.4
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 8.5e-40 167.5 165 53.3
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 8.5e-40 167.5 165 53.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-39 167.2 162 55.6
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-39 167.2 162 55.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.1e-39 167.2 156 57.1
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.9e-39 166.4 156 55.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.5e-39 166.0 166 57.2
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 3.2e-39 165.6 166 51.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.2e-39 165.2 158 54.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 5.5e-39 164.9 158 54.4
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 7.2e-39 164.5 164 51.2
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.6e-38 162.2 118 72.9
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.7e-38 161.8 159 50.9
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 3.0e-37 159.1 139 57.6
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 1.1e-36 157.1 154 53.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 9.7e-36 154.1 159 50.9
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.1e-34 150.6 166 49.4
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 9.1e-34 147.5 155 49.7
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.7e-33 146.0 157 49.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 4.5e-33 145.2 155 49.0
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.7e-32 143.3 139 51.8
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.9e-32 142.5 96 71.9
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 7.2e-31 137.9 108 61.1
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.0e-28 129.8 165 41.2
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 4.4e-28 128.6 146 46.6
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 4.4e-28 128.6 170 42.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.2e-27 126.3 157 43.9
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.4e-26 123.6 170 41.2
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.5e-25 119.0 113 57.5
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.3e-21 106.3 113 51.3
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.0e-20 103.2 92 59.8
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 6.3e-19 98.2 115 45.2
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 4.1e-18 95.5 132 39.4
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 9.2e-18 94.4 91 54.9
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 5.9e-17 91.7 71 64.8
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.6e-14 83.6 103 38.8
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.8e-14 82.8 43 90.7
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.3e-07 58.9 49 55.1
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 2.1e-06 56.6 36 69.4


User provided reference genes

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