Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0097300 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.5e-206 721.5 382 100.0
Rhsim13G0097100 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.2e-171 604.4 388 81.4
Rhsim01G0252700 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.9e-142 507.7 396 69.9
Actinidia09468 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.3e-55 219.5 383 37.9
Rhsim01G0252500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.3e-51 208.0 273 42.1
Actinidia23757 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.1e-50 204.9 281 40.2
Actinidia09465 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.7e-48 197.6 339 38.1
Actinidia23754 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.7e-48 197.6 341 37.8
Rhsim01G0253500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.7e-48 197.6 406 37.9
Actinidia09466 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.3e-48 197.2 352 36.9
Actinidia23756 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.3e-48 197.2 388 35.1
Actinidia23755 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.6e-47 192.6 388 36.1
Actinidia09467 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.4e-45 187.2 346 35.8
Actinidia23759 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.0e-45 186.4 307 36.2
Actinidia23752 Actinidia chinensis HOM05D008231 ORTHO05D010646 9.0e-45 185.3 392 35.5
Actinidia23753 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.4e-44 183.0 388 34.5
Actinidia23760 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.9e-43 179.5 231 37.2
Rhsim01G0252600 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.1e-38 164.1 282 34.4
Rhsim01G0253600 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.2e-38 162.5 424 33.7
Actinidia23390 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.2e-34 150.2 314 32.5
Actinidia38104 Actinidia chinensis HOM05D008231 ORTHO05D023294 1.3e-27 128.3 302 30.1
Actinidia23404 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.8e-27 126.7 319 32.6
Rhsim13G0048600 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.2e-26 123.6 268 31.7
Rhsim13G0048500 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.3e-26 122.1 222 30.6
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.5e-25 120.2 270 29.3
Rhsim13G0048900 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.9e-25 119.0 264 30.7
Actinidia23388 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.0e-24 117.1 341 25.8
Actinidia30037 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.9e-24 116.7 263 28.5
Rhsim13G0048200 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.7e-24 115.9 230 35.2
Actinidia09427 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.9e-23 114.4 308 30.8
Rhsim13G0049100 Rhododendron simsii HOM05D008231 ORTHO05D010646 5.9e-20 102.8 238 29.8
Rhsim13G0049300 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-19 102.1 257 27.6
Actinidia23386 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.3e-19 101.7 379 28.0
Actinidia23708 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.1e-18 98.6 224 35.3
Actinidia24870 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.4e-18 98.2 238 31.5
Rhsim13G0049000 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.4e-18 98.2 249 28.1
CSS0017593 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.2e-18 96.7 340 27.6
CSS0042713 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.2e-18 96.7 340 27.6
Rhsim07G0220100 Rhododendron simsii HOM05D008231 ORTHO05D023294 7.2e-18 95.9 251 27.1
Actinidia30047 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.9e-16 90.1 156 34.0
Actinidia23387 Actinidia chinensis HOM05D000136 ORTHO05D000080 1.5e-15 88.2 155 31.0
CSS0032253 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.3e-15 86.7 340 25.9
Actinidia27157 Actinidia chinensis HOM05D008231 ORTHO05D010646 9.7e-15 85.5 269 27.1
Rhsim13G0048300 Rhododendron simsii HOM05D008231 ORTHO05D339613 1.6e-14 84.7 290 26.9
Actinidia39426 Actinidia chinensis HOM05D008231 ORTHO05D057975 8.2e-14 82.4 224 28.1
Actinidia23096 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.2e-11 74.3 197 29.9
Rhsim13G0048700 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.7e-09 67.4 111 31.5
Actinidia30038 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.3e-08 64.3 83 34.9
Actinidia30040 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.0e-08 63.9 125 31.2
Nn1g02222 Nelumbo nucifera HOM05D000466 ORTHO05D000331 8.8e-08 62.4 102 30.4


User provided reference genes

Program Settings