Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 7.4e-83 310.5 152 100.0
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.3e-43 178.7 106 79.2
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 3.2e-38 162.2 107 75.7
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 3.6e-37 158.7 115 67.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 6.1e-37 157.9 106 69.8
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 3.0e-36 155.6 104 70.2
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 6.7e-36 154.5 105 70.5
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 8.8e-36 154.1 105 71.4
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 4.4e-35 151.8 109 68.8
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 5.7e-35 151.4 104 70.2
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.3e-34 150.2 104 69.2
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 2.2e-34 149.4 104 68.3
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 2.8e-34 149.1 105 64.8
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 2.8e-34 149.1 147 54.4
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.7e-34 148.7 105 70.5
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.1e-33 145.2 104 66.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 4.1e-33 145.2 106 69.8
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.3e-33 144.8 107 66.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 2.7e-32 142.5 107 66.4
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 2.7e-32 142.5 104 68.3
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 4.5e-32 141.7 107 66.4
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 5.9e-32 141.4 110 64.5
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 5.9e-32 141.4 106 66.0
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 7.7e-32 141.0 110 64.5
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.7e-31 139.8 104 66.3
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.2e-31 139.4 108 64.8
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.9e-31 139.0 106 67.0
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.9e-31 139.0 104 65.4
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 3.8e-31 138.7 107 65.4
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 5.0e-31 138.3 106 66.0
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 5.0e-31 138.3 106 66.0
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 1.1e-30 137.1 113 60.2
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.1e-30 137.1 103 68.0
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.5e-30 136.7 105 64.8
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 1.5e-30 136.7 108 64.8
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 2.5e-30 136.0 109 64.2
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.2e-30 135.2 104 65.4
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 5.5e-30 134.8 104 66.3
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 7.2e-30 134.4 106 66.0
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.2e-29 133.7 106 64.2
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 2.1e-29 132.9 104 63.5
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.1e-29 132.9 104 63.5
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.1e-29 132.9 104 63.5
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.7e-29 132.5 88 71.6
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 3.6e-29 132.1 110 63.6
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 3.6e-29 132.1 106 62.3
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 3.6e-29 132.1 106 62.3
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 4.7e-29 131.7 107 63.6
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 6.1e-29 131.3 104 63.5
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 8.0e-29 131.0 107 60.7
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 1.0e-28 130.6 106 58.5
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.0e-28 130.6 119 60.5
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 1.8e-28 129.8 90 70.0
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 1.8e-28 129.8 107 62.6
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.3e-28 129.4 90 67.8
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 4.0e-28 128.6 110 60.9
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 5.2e-28 128.3 113 61.1
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 5.2e-28 128.3 113 61.1
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 8.8e-28 127.5 109 58.7
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 8.8e-28 127.5 107 59.8
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.2e-27 127.1 104 61.5
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 1.5e-27 126.7 106 63.2
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.6e-27 125.9 103 62.1
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.4e-27 125.6 97 61.9
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 3.4e-27 125.6 113 55.8
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 9.8e-27 124.0 114 58.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 9.8e-27 124.0 114 58.8
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 9.8e-27 124.0 102 66.7
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.8e-26 121.7 107 61.7
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 6.3e-26 121.3 106 60.4
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 8.3e-26 120.9 114 57.9
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.4e-25 120.2 98 62.2
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.4e-25 120.2 102 57.8
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.4e-25 120.2 84 71.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 3.1e-25 119.0 109 56.0
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 5.4e-25 118.2 103 64.1
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 7.0e-25 117.9 115 52.2
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 9.1e-25 117.5 87 67.8
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 9.1e-25 117.5 104 61.5
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 4.5e-24 115.2 142 46.5
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 5.9e-24 114.8 95 61.1
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.7e-23 113.2 108 56.5
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 2.2e-23 112.8 111 51.4
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.9e-23 112.5 62 80.6
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 2.9e-23 112.5 95 60.0
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 2.5e-22 109.4 126 46.8
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 2.5e-22 109.4 89 61.8
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 7.2e-22 107.8 64 75.0
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.6e-21 105.5 87 58.6
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 3.6e-21 105.5 59 81.4
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.0e-20 104.0 109 50.5
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-20 103.2 89 56.2
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-20 103.2 87 56.3
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.8e-20 103.2 94 54.3
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 4.0e-20 102.1 87 55.2
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.0e-20 102.1 87 55.2
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 5.2e-20 101.7 87 55.2
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 6.8e-20 101.3 120 47.5
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 6.8e-20 101.3 112 50.0
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 8.8e-20 100.9 87 54.0
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.2e-19 100.5 88 56.8
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.2e-19 100.5 99 53.5
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.0e-19 99.8 87 54.0
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.7e-19 98.2 87 54.0
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 1.3e-18 97.1 96 53.1
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 8.3e-18 94.4 87 50.6
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.8e-17 93.2 87 54.0
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 2.4e-17 92.8 59 71.2
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.1e-17 92.0 87 51.7
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 7.0e-17 91.3 82 53.7
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.2e-16 90.5 87 50.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.6e-16 90.1 87 50.6
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.6e-16 90.1 78 57.7
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.6e-16 90.1 98 49.0
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.0e-16 89.7 91 51.6
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 3.5e-16 89.0 87 50.6
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 3.5e-16 89.0 87 50.6
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 3.5e-16 89.0 87 50.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.5e-16 89.0 69 62.3
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 4.5e-16 88.6 90 50.0
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.8e-16 87.8 60 63.3
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.7e-15 86.7 95 48.4
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 3.8e-15 85.5 94 47.9
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.5e-14 83.6 63 57.1
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 2.5e-14 82.8 64 54.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 8.0e-13 77.8 59 57.6
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 8.0e-13 77.8 59 57.6
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.0e-12 77.4 63 54.0
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.0e-12 77.4 63 54.0
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.0e-12 77.4 63 54.0
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.0e-12 77.4 63 54.0
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 2.7e-08 62.8 77 35.1


User provided reference genes

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