Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0057300 Rhododendron simsii HOM05D003425 ORTHO05D003897 1.7e-134 482.6 233 100.0
Rhsim07G0021400 Rhododendron simsii HOM05D003425 ORTHO05D003897 8.2e-09 65.1 34 91.2
MD15G1023500 Malus domestica HOM05D003425 ORTHO05D003897 1.8e-08 63.9 70 57.1
RcHm_v2.0_Chr6g0301531 Rosa chinensis HOM05D003425 ORTHO05D003897 2.4e-08 63.5 102 39.2
Hma1.2p1_0775F.1_g216480 Hydrangea macrophylla HOM05D003425 ORTHO05D003897 5.3e-08 62.4 34 82.4
Prupe.1G375600 Prunus persica HOM05D003425 ORTHO05D003897 5.3e-08 62.4 63 54.0
MD08G1026900 Malus domestica HOM05D003425 ORTHO05D003897 9.1e-08 61.6 70 55.7
Atru.chr13.426 Acer truncatum HOM05D003425 ORTHO05D003897 1.2e-07 61.2 35 80.0
vmacro13340 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 1.6e-07 60.8 34 79.4
Prupe.1G549800 Prunus persica HOM05D003425 ORTHO05D003897 2.7e-07 60.1 39 69.2
Ah.05g176930 Amaranthus hybridus HOM05D003425 ORTHO05D003897 3.5e-07 59.7 45 62.2
Cpa.g.sc99.35 Carica papaya HOM05D003425 ORTHO05D003897 3.5e-07 59.7 34 79.4
FAN20G1443 Fragaria x ananassa HOM05D003425 ORTHO05D003897 3.5e-07 59.7 39 71.8
FAN27G0002 Fragaria x ananassa HOM05D003425 ORTHO05D003897 3.5e-07 59.7 39 71.8
TAR625G0421 Trochodendron aralioides HOM05D003425 ORTHO05D003897 3.5e-07 59.7 34 82.4
AUR62014493 Chenopodium quinoa HOM05D003425 ORTHO05D003897 5.9e-07 58.9 35 77.1
AUR62044165 Chenopodium quinoa HOM05D003425 ORTHO05D003897 5.9e-07 58.9 35 77.1
Duzib093G1530 Durio zibethinus HOM05D003425 ORTHO05D003897 5.9e-07 58.9 38 71.1
Psat5g016160 Pisum sativum HOM05D003425 ORTHO05D003897 5.9e-07 58.9 39 66.7
Rhsim06G0029700 Rhododendron simsii HOM05D003425 ORTHO05D003897 5.9e-07 58.9 34 79.4
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 7.7e-07 58.5 34 76.5
Phvul.009G060100 Phaseolus vulgaris HOM05D003425 ORTHO05D003897 7.7e-07 58.5 71 47.9
CSS0020037 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 1.0e-06 58.2 34 73.5
Cfa013863 Carpinus fangiana HOM05D003425 ORTHO05D003897 1.0e-06 58.2 38 71.1
FvH4_2g39440 Fragaria vesca HOM05D003425 ORTHO05D003897 1.0e-06 58.2 39 69.2
Glyma.04G030000 Glycine max HOM05D003425 ORTHO05D003897 1.0e-06 58.2 39 66.7
Aa31LG9G12880 Aethionema arabicum HOM05D003425 ORTHO05D003897 1.3e-06 57.8 39 66.7
CSS0009417 Camellia sinensis var. sinensis HOM05D003425 ORTHO05D003897 1.3e-06 57.8 34 79.4
Glyma.06G030100 Glycine max HOM05D003425 ORTHO05D003897 1.3e-06 57.8 39 64.1
Sed0012207 Sechium edule HOM05D003425 ORTHO05D003897 1.3e-06 57.8 39 66.7
Manes.18G020000 Manihot esculenta HOM05D003425 ORTHO05D003897 1.7e-06 57.4 34 76.5
AT5G42810 Arabidopsis thaliana HOM05D003425 ORTHO05D003897 2.2e-06 57.0 34 73.5
Carub.0002s0599 Capsella rubella HOM05D003425 ORTHO05D003897 2.2e-06 57.0 38 71.1
Eucgr.F01873 Eucalyptus grandis HOM05D003425 ORTHO05D003897 2.2e-06 57.0 34 67.6
Manes.05G156100 Manihot esculenta HOM05D003425 ORTHO05D003897 2.2e-06 57.0 39 66.7
THA.LOC104814145 Tarenaya hassleriana HOM05D003425 ORTHO05D003897 2.2e-06 57.0 39 66.7
vmacro21674 Vaccinium macrocarpon HOM05D003425 ORTHO05D003897 2.2e-06 57.0 34 76.5
Medtr3g112130 Medicago truncatula HOM05D003425 ORTHO05D003897 2.9e-06 56.6 70 44.3
Nn5g29685 Nelumbo nucifera HOM05D003425 ORTHO05D003897 2.9e-06 56.6 33 78.8
TWI56G1347 Tripterygium wilfordii HOM05D003425 ORTHO05D003897 2.9e-06 56.6 39 66.7
Actinidia22523 Actinidia chinensis HOM05D003425 ORTHO05D003897 3.8e-06 56.2 34 70.6
Potri.005G230200 Populus trichocarpa HOM05D003425 ORTHO05D003897 3.8e-06 56.2 34 76.5
Sp1g19600 Schrenkiella parvula HOM05D003425 ORTHO05D003897 3.8e-06 56.2 34 76.5
Carub.0008s0609 Capsella rubella HOM05D003425 ORTHO05D003897 5.0e-06 55.8 34 73.5
Ciclev10001170m.g Citrus clementina HOM05D003425 ORTHO05D003897 5.0e-06 55.8 34 73.5
Thecc.08G031800 Theobroma cacao HOM05D003425 ORTHO05D003897 5.0e-06 55.8 38 68.4
VMungo1309G3095 Vigna mungo HOM05D003425 ORTHO05D003897 5.0e-06 55.8 39 64.1
Cpa.g.sc104.107 Carica papaya HOM05D003425 ORTHO05D003897 6.5e-06 55.5 35 68.6
ClCG05G018770 Citrullus lanatus HOM05D003425 ORTHO05D003897 6.5e-06 55.5 34 73.5
COL.COLO4_26258 Corchorus olitorius HOM05D003425 ORTHO05D003897 6.5e-06 55.5 38 65.8
CsaV3_2G028930 Cucumis sativus L. HOM05D003425 ORTHO05D003897 6.5e-06 55.5 39 66.7
Duzib041G0299 Durio zibethinus HOM05D003425 ORTHO05D003897 6.5e-06 55.5 56 46.4
Potri.002G032900 Populus trichocarpa HOM05D003425 ORTHO05D003897 6.5e-06 55.5 39 64.1
Haze_22537 Corylus avellana HOM05D003425 ORTHO05D003897 8.5e-06 55.1 38 68.4
ECA246G1007 Erigeron canadensis HOM05D003425 ORTHO05D003897 8.5e-06 55.1 33 72.7
Gohir.A05G191900 Gossypium hirsutum HOM05D003425 ORTHO05D003897 8.5e-06 55.1 33 72.7
Gohir.A06G008100 Gossypium hirsutum HOM05D003425 ORTHO05D003897 8.5e-06 55.1 68 42.6
Gohir.D05G195200 Gossypium hirsutum HOM05D003425 ORTHO05D003897 8.5e-06 55.1 33 72.7
Gohir.D06G003800 Gossypium hirsutum HOM05D003425 ORTHO05D003897 8.5e-06 55.1 68 42.6
Gorai.009G200000 Gossypium raimondii HOM05D003425 ORTHO05D003897 8.5e-06 55.1 33 72.7
Gorai.010G008400 Gossypium raimondii HOM05D003425 ORTHO05D003897 8.5e-06 55.1 68 42.6
TPR.G12467 Trifolium pratense HOM05D003425 ORTHO05D003897 8.5e-06 55.1 39 64.1


User provided reference genes

Program Settings