Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 8.4e-184 647.5 506 100.0
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 1.4e-93 347.8 367 58.9
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 3.2e-74 283.5 344 52.0
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.9e-64 250.0 339 49.3
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 6.7e-64 249.2 340 49.1
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.2e-62 244.2 368 48.4
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 2.2e-54 217.6 343 44.6
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.6e-49 201.4 343 43.7
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 3.6e-49 200.3 346 46.8
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 6.1e-49 199.5 352 42.0
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 6.1e-49 199.5 348 45.7
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 1.0e-48 198.7 372 38.2
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 5.2e-48 196.4 384 40.6
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.2e-48 196.4 355 41.4
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 8.8e-48 195.7 337 41.2
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.6e-47 194.1 193 60.6
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.8e-46 190.7 341 40.5
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 9.1e-45 185.7 339 40.7
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 1.2e-44 185.3 339 41.3
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 5.9e-44 183.0 349 39.0
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 1.0e-43 182.2 346 41.0
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 1.0e-43 182.2 340 42.4
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.7e-43 181.4 348 40.2
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 2.9e-43 180.6 350 39.4
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 5.0e-43 179.9 346 40.5
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 6.5e-43 179.5 369 40.1
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 6.5e-43 179.5 348 40.2
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 8.5e-43 179.1 361 39.9
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 7.2e-42 176.0 370 37.3
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 9.4e-42 175.6 332 41.3
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 1.2e-41 175.3 370 35.7
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 2.1e-41 174.5 333 42.3
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 2.7e-41 174.1 340 39.7
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 3.6e-41 173.7 370 36.5
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 3.6e-41 173.7 335 40.0
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 4.7e-41 173.3 347 43.2
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.8e-40 171.4 370 36.5
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 1.8e-40 171.4 370 36.5
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 3.0e-40 170.6 381 37.0
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 8.8e-40 169.1 330 40.6
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.2e-39 168.7 408 34.1
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 1.2e-39 168.7 331 40.8
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 1.5e-39 168.3 358 38.0
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 2.0e-39 167.9 369 35.8
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 3.3e-39 167.2 342 38.9
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 1.7e-38 164.9 358 39.9
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 2.2e-38 164.5 343 38.2
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 6.3e-38 162.9 340 38.5
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 6.3e-38 162.9 356 37.1
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 6.3e-38 162.9 356 37.1
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 8.2e-38 162.5 213 45.1
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.4e-37 161.8 342 40.9
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 2.4e-37 161.0 347 36.9
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 1.2e-36 158.7 340 38.2
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 1.6e-36 158.3 363 36.9
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 2.0e-36 157.9 365 36.7
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 2.7e-36 157.5 339 41.6
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 5.9e-36 156.4 339 37.8
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 5.9e-36 156.4 211 45.0
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 1.0e-35 155.6 347 37.8
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.0e-35 155.6 337 40.7
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 1.3e-35 155.2 341 37.0
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 2.2e-35 154.5 369 38.2
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 6.5e-35 152.9 368 36.1
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 6.5e-35 152.9 367 34.9
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 2.5e-34 151.0 365 37.3
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 5.5e-34 149.8 388 33.8
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 1.2e-33 148.7 369 36.0
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 3.6e-33 147.1 330 36.7
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 4.7e-33 146.7 377 38.2
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 6.1e-33 146.4 340 39.1
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 5.2e-32 143.3 369 35.5
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.2e-31 142.1 362 35.9
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 2.0e-31 141.4 344 36.6
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 3.4e-31 140.6 313 36.7
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 5.7e-31 139.8 335 34.9
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 5.7e-31 139.8 344 36.0
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 9.8e-31 139.0 332 35.8
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 1.3e-30 138.7 330 36.1
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.7e-30 138.3 328 36.3
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.7e-30 138.3 328 36.3
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 1.7e-30 138.3 337 35.9
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 8.3e-30 136.0 201 42.8
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.8e-29 134.8 344 34.3
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 2.0e-28 131.3 336 34.8
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 3.5e-28 130.6 333 35.4
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.0e-27 129.0 196 42.3
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 1.7e-27 128.3 330 35.8
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 2.9e-27 127.5 331 33.5
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 3.8e-27 127.1 206 44.2
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 6.5e-27 126.3 338 34.6
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 8.5e-27 125.9 196 40.8
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.1e-26 125.6 337 34.4
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 5.5e-26 123.2 331 34.4
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 3.6e-25 120.6 196 39.8
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 3.0e-24 117.5 213 38.5
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 4.0e-24 117.1 194 39.7
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 6.8e-24 116.3 329 32.8
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 1.2e-23 115.5 193 39.4
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 1.5e-23 115.2 202 41.6
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 4.4e-23 113.6 211 45.0
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 4.4e-23 113.6 216 41.7
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 6.3e-22 109.8 199 42.2
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 2.3e-19 101.3 390 31.0
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 2.3e-19 101.3 348 30.5
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 1.1e-18 99.0 55 85.5
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 7.3e-18 96.3 53 88.7
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 3.6e-17 94.0 214 31.8
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 6.1e-17 93.2 53 83.0
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 8.9e-16 89.4 165 38.8
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 5.7e-15 86.7 61 68.9
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 7.5e-15 86.3 61 65.6
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 9.8e-15 85.9 52 80.8
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 1.7e-14 85.1 320 29.1
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 1.1e-13 82.4 53 71.7
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 1.8e-13 81.6 324 27.8
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 2.4e-13 81.3 64 71.9
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 3.0e-11 74.3 353 28.9
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 1.5e-07 62.0 42 73.8


User provided reference genes

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