Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 6.8e-85 317.4 172 100.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.3e-67 260.0 164 81.7
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.5e-63 245.7 164 83.5
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 3.6e-62 241.9 165 75.8
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.8e-60 234.6 164 72.6
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 3.2e-58 228.8 164 73.2
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.0e-56 222.2 164 76.8
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.1e-54 216.1 168 65.5
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.4e-53 212.6 162 67.3
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.2e-52 210.3 161 62.7
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.6e-52 207.6 163 73.6
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.3e-51 206.8 163 65.6
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.7e-51 206.5 167 62.9
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.8e-51 205.3 163 73.0
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 4.9e-51 204.9 161 64.0
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 6.4e-51 204.5 161 65.2
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 8.4e-51 204.1 166 64.5
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.1e-50 203.8 178 64.6
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.9e-50 203.0 168 64.9
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 3.2e-50 202.2 160 66.2
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 3.2e-50 202.2 159 65.4
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 4.2e-50 201.8 161 67.1
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 5.4e-50 201.4 155 63.9
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.3e-50 200.7 161 64.6
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.2e-49 200.3 155 68.4
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.2e-49 200.3 161 64.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.7e-49 199.1 166 68.1
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 2.7e-49 199.1 164 70.7
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 2.7e-49 199.1 155 63.9
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 6.0e-49 198.0 161 62.7
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 7.9e-49 197.6 166 60.8
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.3e-48 196.8 165 63.0
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.3e-48 196.8 165 67.9
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 1.3e-48 196.8 168 64.9
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.8e-48 196.4 162 60.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.8e-48 196.4 161 69.6
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.3e-48 196.1 163 70.6
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.1e-47 193.7 161 62.1
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 1.9e-47 193.0 170 60.6
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 1.9e-47 193.0 164 69.5
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.9e-47 193.0 159 72.3
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 3.3e-47 192.2 164 58.5
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 5.6e-47 191.4 166 59.6
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 5.6e-47 191.4 167 62.3
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 5.6e-47 191.4 165 61.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.1e-46 189.5 164 64.0
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 3.7e-46 188.7 178 55.6
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 8.1e-46 187.6 161 64.6
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 8.1e-46 187.6 159 70.4
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.1e-46 187.6 156 61.5
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.8e-45 186.4 158 57.6
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.8e-45 186.4 126 72.2
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.8e-45 186.4 162 64.8
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.1e-45 185.7 175 58.3
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 4.0e-45 185.3 161 68.9
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 6.9e-45 184.5 193 61.1
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 9.0e-45 184.1 161 58.4
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.6e-44 182.6 165 64.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.4e-44 182.2 164 62.8
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 5.8e-44 181.4 161 65.2
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 9.9e-44 180.6 162 61.7
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.9e-42 176.4 162 61.1
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.9e-42 176.4 166 59.6
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 3.2e-42 175.6 164 57.9
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.2e-42 175.6 165 67.9
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.2e-42 175.3 165 67.3
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 9.3e-42 174.1 158 60.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.6e-41 173.3 154 58.4
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 7.9e-41 171.0 169 58.6
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 3.0e-40 169.1 155 57.4
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 3.9e-40 168.7 161 54.7
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.1e-39 167.2 153 57.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 5.6e-39 164.9 143 60.8
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 9.6e-39 164.1 161 58.4
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-38 163.3 155 55.5
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.1e-38 162.9 166 55.4
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.7e-38 162.2 147 59.9
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.7e-38 162.2 147 59.9
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 4.8e-38 161.8 144 59.7
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.8e-38 161.8 147 58.5
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 8.2e-38 161.0 164 57.3
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 8.2e-38 161.0 161 57.1
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 8.2e-38 161.0 161 58.4
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.4e-37 159.5 161 55.9
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 4.0e-37 158.7 185 50.3
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 5.3e-37 158.3 161 52.8
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 6.9e-37 157.9 161 56.5
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.9e-35 152.5 155 56.8
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.9e-35 152.5 162 52.5
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 3.8e-35 152.1 142 54.2
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.9e-34 149.8 155 55.5
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.2e-34 148.7 146 52.1
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 9.3e-34 147.5 164 50.0
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 4.6e-33 145.2 136 67.6
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.3e-32 143.7 158 53.8
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.8e-32 143.3 146 52.7
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.8e-32 143.3 168 50.6
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.0e-32 142.5 149 51.7
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 6.7e-32 141.4 147 53.1
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 8.7e-32 141.0 140 52.1
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.9e-31 139.8 140 51.4
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 2.5e-31 139.4 149 51.7
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-30 137.1 141 53.2
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.6e-30 136.7 161 50.9
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 2.8e-30 136.0 144 52.8
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 3.7e-30 135.6 156 53.2
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 4.8e-30 135.2 154 50.6
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.4e-29 133.7 167 47.3
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 3.1e-29 132.5 151 52.3
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 6.9e-29 131.3 147 50.3
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 6.9e-29 131.3 170 48.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 9.0e-29 131.0 149 52.3
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-28 130.6 151 51.7
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.5e-28 130.2 142 51.4
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.0e-28 129.8 142 51.4
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 2.0e-28 129.8 156 50.6
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 2.6e-28 129.4 129 51.9
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.6e-28 129.4 151 51.7
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 5.9e-28 128.3 144 49.3
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.0e-27 127.5 149 48.3
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.3e-27 127.1 150 50.7
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.3e-27 127.1 150 50.7
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-27 127.1 139 50.4
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.2e-27 126.3 149 49.0
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 2.2e-27 126.3 149 49.0
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 2.2e-27 126.3 149 48.3
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 3.8e-27 125.6 162 46.9
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 8.5e-27 124.4 158 50.0
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-25 119.4 139 49.6
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-25 119.4 157 44.6
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-25 119.4 139 47.5
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 4.6e-25 118.6 112 58.9
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 4.3e-23 112.1 130 46.9
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.4e-23 111.3 83 67.5
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.4e-23 111.3 83 67.5
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 3.7e-22 109.0 143 46.2
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 3.1e-21 105.9 140 45.0
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 4.1e-21 105.5 144 43.8
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 4.1e-21 105.5 160 40.6
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-19 100.9 125 47.2
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.4e-18 97.1 145 42.8
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 2.1e-17 93.2 142 43.0
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.8e-16 90.1 91 51.6
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.8e-16 90.1 150 44.0
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 1.1e-15 87.4 151 43.0
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.1e-15 87.4 151 43.7
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.1e-15 87.4 74 60.8
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.0e-15 86.7 151 43.7
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.0e-15 86.7 151 43.7
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 2.0e-15 86.7 164 37.2
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 2.6e-15 86.3 107 50.5
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.6e-15 86.3 151 43.0
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 3.3e-15 85.9 66 63.6
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 3.3e-15 85.9 92 51.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 2.2e-14 83.2 86 62.8
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 6.9e-13 78.2 68 58.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.5e-12 77.0 141 34.0
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 1.5e-12 77.0 65 67.7
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 2.9e-11 72.8 88 46.6
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 6.5e-11 71.6 61 57.4
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.1e-10 70.9 60 58.3
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 3.2e-10 69.3 61 55.7
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-09 66.2 65 55.4
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 6.1e-09 65.1 142 35.9
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.8e-08 63.5 59 55.9
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.8e-08 63.5 59 55.9
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 9.7e-07 57.8 60 56.7
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 9.7e-07 57.8 55 54.5
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 1.7e-06 57.0 132 34.8


User provided reference genes

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