Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 8.1e-266 919.8 467 100.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.2e-146 523.1 394 69.3
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 4.8e-125 452.2 274 79.2
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.1e-118 431.0 358 60.9
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 2.2e-117 426.8 359 60.7
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 7.7e-115 418.3 353 58.4
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 2.9e-114 416.4 370 62.4
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 8.5e-114 414.8 376 61.4
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 8.5e-114 414.8 355 60.8
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.5e-113 414.1 355 60.3
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 4.2e-113 412.5 352 59.7
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.1e-112 410.2 355 60.3
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.7e-112 409.8 354 60.2
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.7e-112 409.1 355 60.3
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 5.7e-110 402.1 357 58.3
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.8e-109 399.8 360 59.7
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.4e-108 397.5 358 60.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 4.1e-108 396.0 354 59.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.0e-107 393.7 356 59.6
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 2.0e-107 393.7 414 51.7
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.3e-106 391.0 359 57.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 3.2e-105 386.3 356 56.2
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 7.2e-105 385.2 353 56.4
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.2e-104 384.4 357 58.0
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.2e-104 384.4 356 56.2
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.1e-104 383.6 333 60.4
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.1e-104 383.6 360 56.1
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.7e-104 383.3 394 52.3
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.7e-104 383.3 358 57.0
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 2.3e-103 380.2 355 56.9
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 3.0e-103 379.8 354 56.8
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 8.8e-103 378.3 437 49.4
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.6e-102 376.7 351 57.5
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.6e-102 376.7 360 56.4
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.6e-102 376.7 354 54.8
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 7.5e-102 375.2 358 54.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 2.2e-101 373.6 384 53.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 3.7e-101 372.9 353 56.4
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.1e-100 371.3 354 54.2
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.4e-100 370.9 358 54.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.1e-100 369.8 362 54.7
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 7.0e-100 368.6 415 52.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.1e-100 368.2 354 54.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 4.5e-99 365.9 387 51.2
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.5e-99 365.9 354 56.2
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 5.9e-99 365.5 366 55.5
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 1.3e-98 364.4 366 54.6
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.7e-98 364.0 356 55.3
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 5.0e-98 362.5 226 74.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.9e-97 360.5 263 68.8
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.5e-97 360.1 355 55.2
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.5e-97 360.1 355 54.4
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 7.2e-97 358.6 371 52.3
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.6e-96 357.5 363 50.7
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 4.0e-95 352.8 438 46.8
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 4.4e-94 349.4 357 52.4
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 5.7e-94 349.0 357 52.7
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.3e-93 347.8 372 51.9
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 2.2e-93 347.1 356 53.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.1e-88 330.5 263 59.3
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.6e-88 329.7 262 62.2
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.4e-87 327.8 254 61.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.8e-87 327.4 254 61.8
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 4.0e-87 326.2 263 58.2
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.6e-86 323.6 219 68.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 4.4e-86 322.8 385 47.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 4.4e-86 322.8 385 47.3
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 5.7e-86 322.4 377 48.8
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.3e-85 321.2 377 48.8
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.2e-85 320.5 248 61.3
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 2.9e-85 320.1 257 59.9
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 6.4e-85 318.9 254 60.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.4e-84 317.0 253 59.7
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.2e-84 316.6 390 46.7
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 4.1e-84 316.2 254 59.1
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 7.0e-84 315.5 355 50.4
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.6e-83 314.3 396 45.5
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 5.9e-83 312.4 256 61.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.1e-80 303.9 351 47.3
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 3.6e-80 303.1 364 47.8
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.0e-79 301.6 302 55.6
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.8e-79 298.9 366 43.7
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 2.0e-78 297.4 302 54.3
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 9.8e-78 295.0 234 60.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.7e-74 284.3 276 55.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.2e-72 275.8 356 42.7
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.0e-71 273.1 361 44.3
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.1e-68 265.0 337 52.5
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.1e-65 255.0 212 57.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.5e-65 254.6 272 52.2
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 7.3e-65 252.3 298 49.3
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.6e-64 251.1 143 81.1
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.6e-64 251.1 241 49.0
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.1e-60 236.5 246 49.6
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 3.9e-58 229.9 153 71.9
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 3.6e-56 223.4 376 41.2
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.1e-55 221.9 242 51.7
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 3.1e-55 220.3 214 52.8
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.6e-51 208.0 275 45.5
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.2e-48 196.1 128 71.1
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.0e-47 193.4 120 67.5
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.1e-41 175.3 225 42.7
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.1e-40 171.0 155 60.6
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.6e-40 170.2 260 40.0
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 3.0e-34 150.6 93 77.4
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 2.5e-33 147.5 82 80.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 4.5e-30 136.7 236 41.1
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.9e-29 134.0 122 56.6
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 3.2e-28 130.6 238 34.0
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.0e-27 126.3 274 32.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.1e-24 117.9 135 45.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 2.1e-19 101.3 149 42.3
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.8e-18 98.2 56 75.0
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.4e-15 88.6 58 63.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.4e-12 78.6 53 62.3
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.7e-08 63.9 179 29.6


User provided reference genes

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