Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0048700 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.5e-184 649.4 347 100.0
Rhsim13G0048900 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.6e-43 178.7 175 62.9
Rhsim02G0117100 Rhododendron simsii HOM05D008231 ORTHO05D010646 4.9e-42 176.0 179 63.1
Rhsim13G0048800 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.2e-41 173.3 190 53.2
Rhsim02G0117200 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.7e-40 170.2 194 64.9
Rhsim13G0048600 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.4e-30 135.6 172 43.0
Rhsim13G0048500 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.1e-28 130.2 136 50.0
Actinidia30047 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.9e-25 120.9 129 51.2
Rhsim13G0048200 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-23 115.2 160 41.9
Rhsim13G0049300 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.3e-21 105.9 142 44.4
Actinidia23390 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.1e-20 103.2 131 39.7
Actinidia23402 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.0e-18 98.6 136 46.3
Actinidia30040 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.0e-18 98.6 132 40.2
Actinidia23759 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.0e-18 96.3 121 37.2
Actinidia09427 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.9e-17 94.4 137 38.0
Actinidia23388 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.5e-17 92.8 135 38.5
Actinidia23760 Actinidia chinensis HOM05D008231 ORTHO05D010646 9.4e-17 92.0 138 34.8
Actinidia23754 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.2e-16 91.7 136 35.3
Actinidia09468 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.6e-16 91.3 139 35.3
Actinidia23755 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.7e-16 90.5 138 34.1
Actinidia23752 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.1e-16 89.4 138 34.1
Actinidia23753 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.1e-16 89.4 138 34.8
Actinidia23757 Actinidia chinensis HOM05D008231 ORTHO05D010646 7.9e-16 89.0 176 31.2
Actinidia23387 Actinidia chinensis HOM05D000136 ORTHO05D000080 1.0e-15 88.6 124 36.3
Rhsim13G0049000 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-15 88.6 139 38.1
Rhsim13G0049100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.4e-15 88.2 123 38.2
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.9e-15 86.7 123 39.0
Actinidia23756 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.7e-15 85.9 140 34.3
Actinidia09467 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.3e-14 83.6 138 35.5
Actinidia09465 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.7e-14 82.8 110 39.1
Actinidia30037 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.3e-13 81.6 126 38.1
Rhsim01G0253500 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.2e-13 80.9 126 32.5
Rhsim01G0252700 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.3e-13 79.3 123 35.0
Rhsim01G0253600 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.1e-12 77.0 115 34.8
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 5.3e-12 76.3 68 47.1
Rhsim07G0220100 Rhododendron simsii HOM05D008231 ORTHO05D023294 7.0e-12 75.9 107 40.2
Actinidia23386 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.9e-11 72.8 129 38.8
Rhsim13G0097300 Rhododendron simsii HOM05D008231 ORTHO05D010646 5.9e-11 72.8 111 31.5
Actinidia23404 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.9e-10 70.5 142 36.6
Actinidia23403 Actinidia chinensis HOM05D062810 ORTHO05D010646 5.0e-10 69.7 108 41.7
Actinidia38104 Actinidia chinensis HOM05D008231 ORTHO05D023294 5.0e-10 69.7 140 33.6
Rhsim13G0097100 Rhododendron simsii HOM05D008231 ORTHO05D010646 5.0e-10 69.7 133 27.8
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.5e-10 68.9 73 49.3
Actinidia20377 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.9e-09 67.8 97 38.1
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.9e-09 67.8 90 37.8
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-09 67.8 67 46.3
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.2e-09 67.0 66 47.0
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.4e-09 65.5 65 46.2
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-08 65.1 67 49.3
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.1e-08 64.3 66 45.5
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.7e-08 63.9 65 46.2
Rhsim01G0252600 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.7e-08 63.9 114 34.2
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.0e-08 62.4 72 41.7
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.0e-08 62.4 82 37.8
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-07 61.6 174 29.9
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.0e-07 60.5 72 40.3
COL.COLO4_29402 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.0e-07 60.5 66 42.4
CSS0017593 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.0e-07 60.1 90 36.7
CSS0032253 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.0e-07 60.1 90 36.7
CSS0042713 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 4.0e-07 60.1 90 36.7
COL.COLO4_07246 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.2e-07 59.7 221 25.3
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 5.2e-07 59.7 117 32.5
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.7e-07 59.3 72 40.3
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 6.7e-07 59.3 93 37.6
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 6.7e-07 59.3 87 39.1
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.6e-06 57.4 183 25.1


User provided reference genes

Program Settings