Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0048500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.3e-198 696.4 417 100.0
Rhsim13G0048600 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.8e-89 332.8 380 49.5
Rhsim13G0048900 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.7e-69 265.0 262 52.3
Rhsim02G0117100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-65 255.0 262 51.1
Rhsim13G0048800 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.8e-54 215.7 394 39.1
Actinidia30047 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.5e-53 214.5 261 46.7
Rhsim02G0117200 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.3e-52 211.5 281 45.9
Actinidia23390 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.3e-44 182.6 255 37.6
Rhsim13G0049300 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.4e-43 181.4 258 41.1
Rhsim13G0049000 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.9e-40 171.0 260 38.5
Rhsim13G0048200 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-38 165.2 273 39.9
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.3e-38 164.1 265 38.5
Actinidia30037 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.9e-36 156.4 264 33.0
Rhsim13G0049100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.0e-33 148.7 244 36.5
Actinidia09427 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.9e-33 146.7 243 37.4
Actinidia23388 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.3e-32 143.3 235 39.1
Rhsim01G0252500 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.6e-31 140.2 247 35.2
Actinidia23759 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.1e-30 137.1 241 34.4
Actinidia09465 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.0e-30 136.7 241 35.3
Actinidia23386 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.0e-30 136.7 232 37.1
Actinidia23756 Actinidia chinensis HOM05D008231 ORTHO05D010646 8.9e-30 135.6 265 31.3
Rhsim01G0253500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.5e-29 134.8 230 35.7
Actinidia23760 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.9e-28 129.8 264 32.2
Actinidia23404 Actinidia chinensis HOM05D008231 ORTHO05D010646 8.3e-28 129.0 271 35.4
Rhsim13G0048700 Rhododendron simsii HOM05D008231 ORTHO05D010646 8.3e-28 129.0 136 50.0
Actinidia30040 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.1e-27 128.6 249 34.1
Rhsim01G0252700 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.4e-27 127.5 229 32.8
Actinidia09467 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.2e-27 127.1 225 32.9
Actinidia23753 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.1e-27 126.7 253 32.0
Rhsim13G0097300 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.2e-27 125.6 222 30.6
Actinidia09468 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.2e-26 125.2 228 32.9
Actinidia23755 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.0e-26 124.4 264 31.1
Actinidia23754 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.7e-26 124.0 268 31.3
Rhsim13G0097100 Rhododendron simsii HOM05D008231 ORTHO05D010646 4.6e-26 123.2 222 31.1
Actinidia23757 Actinidia chinensis HOM05D008231 ORTHO05D010646 7.8e-26 122.5 229 31.9
Actinidia23389 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.6e-25 119.4 258 32.6
Actinidia09466 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.5e-24 118.2 223 31.4
Actinidia23752 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.6e-24 116.3 253 30.4
Actinidia23096 Actinidia chinensis HOM05D008231 ORTHO05D010646 9.5e-24 115.5 240 33.8
Actinidia38104 Actinidia chinensis HOM05D008231 ORTHO05D023294 2.8e-23 114.0 249 32.9
CSS0017593 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 2.8e-23 114.0 247 30.8
CSS0042713 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 2.8e-23 114.0 247 30.8
Rhsim01G0252600 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.5e-21 108.2 234 30.3
Rhsim01G0253600 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.5e-21 105.9 229 31.0
CSS0032253 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 9.9e-21 105.5 247 29.6
Actinidia27157 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.4e-19 101.7 262 29.4
Actinidia23402 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.4e-19 100.9 210 35.7
Actinidia30041 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.6e-17 92.8 176 33.5
Actinidia23387 Actinidia chinensis HOM05D000136 ORTHO05D000080 7.3e-16 89.4 170 29.4
Rhsim13G0048300 Rhododendron simsii HOM05D008231 ORTHO05D339613 1.3e-12 78.6 264 27.3
Actinidia23385 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.2e-07 62.0 81 37.0
Actinidia23403 Actinidia chinensis HOM05D062810 ORTHO05D010646 2.8e-07 60.8 196 28.1
QL12p009276 Quercus lobata HOM05D000466 ORTHO05D012484 1.4e-06 58.5 123 30.1
QL12p009703 Quercus lobata HOM05D000466 ORTHO05D012484 1.4e-06 58.5 123 30.1
Actinidia23708 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.4e-06 57.8 117 29.1


User provided reference genes

Program Settings