Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0048200 Rhododendron simsii HOM05D008231 ORTHO05D010646 0.0e+00 2640.9 1316 100.0
Actinidia30047 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.4e-83 314.7 1129 29.4
Actinidia30037 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.0e-60 238.0 484 33.5
Actinidia09427 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.5e-54 218.8 306 44.8
Actinidia23390 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.9e-50 204.5 256 43.8
Actinidia23388 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.5e-46 192.2 257 43.6
Rhsim02G0117100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.7e-42 179.5 278 42.4
Rhsim13G0048600 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.2e-40 173.3 287 39.4
Rhsim13G0048900 Rhododendron simsii HOM05D008231 ORTHO05D010646 2.1e-40 172.6 277 41.9
Actinidia30040 Actinidia chinensis HOM05D008231 ORTHO05D010646 3.5e-40 171.8 265 37.7
Rhsim13G0048500 Rhododendron simsii HOM05D008231 ORTHO05D010646 7.4e-38 164.1 273 39.9
Actinidia23386 Actinidia chinensis HOM05D008231 ORTHO05D010646 9.6e-38 163.7 257 44.0
Rhsim13G0048800 Rhododendron simsii HOM05D008231 ORTHO05D010646 5.3e-36 157.9 311 39.2
Rhsim02G0117200 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.0e-36 157.1 296 40.9
Actinidia23756 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.7e-31 141.0 259 35.1
Actinidia23387 Actinidia chinensis HOM05D000136 ORTHO05D000080 1.5e-30 139.8 176 42.0
Actinidia23389 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.9e-30 139.4 236 41.1
Actinidia23759 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.5e-30 139.0 257 33.9
Actinidia23757 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.3e-30 138.3 267 33.7
Actinidia23755 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.7e-30 137.9 272 34.6
Rhsim13G0049300 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.6e-30 137.1 268 37.3
Actinidia23760 Actinidia chinensis HOM05D008231 ORTHO05D010646 8.2e-29 134.0 257 32.7
Rhsim01G0252500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.4e-28 133.3 260 36.5
Actinidia09467 Actinidia chinensis HOM05D008231 ORTHO05D010646 4.1e-28 131.7 272 32.0
Rhsim01G0253500 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.5e-27 129.8 245 35.9
Actinidia23752 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.0e-26 127.1 269 34.2
Actinidia39426 Actinidia chinensis HOM05D008231 ORTHO05D057975 1.7e-26 126.3 278 33.8
Rhsim13G0097100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.7e-26 126.3 238 35.7
Actinidia23404 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.2e-26 125.9 278 33.8
Actinidia23096 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.0e-26 124.8 235 37.0
Rhsim01G0252700 Rhododendron simsii HOM05D008231 ORTHO05D010646 9.3e-25 120.6 233 34.3
Rhsim13G0097300 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.2e-24 120.2 230 35.2
Actinidia27157 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.3e-23 115.9 239 35.6
Actinidia09465 Actinidia chinensis HOM05D008231 ORTHO05D010646 5.1e-23 114.8 272 34.2
Rhsim13G0048700 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.9e-22 112.8 160 41.9
Rhsim13G0049000 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.3e-22 112.1 239 35.1
CSS0042713 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 5.7e-22 111.3 295 28.8
CSS0017593 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 1.3e-21 110.2 295 28.8
Rhsim13G0049100 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.6e-21 109.8 238 33.6
CSS0032253 Camellia sinensis var. sinensis HOM05D008231 ORTHO05D023294 3.7e-21 108.6 295 28.1
Actinidia09468 Actinidia chinensis HOM05D008231 ORTHO05D010646 8.2e-21 107.5 256 29.3
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 1.8e-20 106.3 255 32.2
Rhsim01G0252600 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.9e-20 104.4 241 30.3
Actinidia23402 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.3e-18 100.1 226 35.8
Actinidia24870 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.2e-18 99.4 206 34.5
Rhsim13G0048100 Rhododendron simsii HOM05D046951 ORTHO05D340063 2.2e-18 99.4 435 23.7
Actinidia20377 Actinidia chinensis HOM05D008231 ORTHO05D010646 6.5e-18 97.8 119 45.4
Actinidia09466 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.1e-16 92.8 264 29.5
Rhsim01G0253600 Rhododendron simsii HOM05D008231 ORTHO05D010646 3.0e-15 89.0 237 30.8
Actinidia30041 Actinidia chinensis HOM05D008231 ORTHO05D010646 1.5e-14 86.7 355 29.6
Actinidia23754 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.0e-14 86.3 205 33.2
Actinidia23753 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.5e-14 85.9 206 30.1
Actinidia30038 Actinidia chinensis HOM05D008231 ORTHO05D010646 2.5e-14 85.9 110 47.3
Rhsim13G0048300 Rhododendron simsii HOM05D008231 ORTHO05D339613 5.7e-14 84.7 535 22.4
Actinidia23385 Actinidia chinensis HOM05D008231 ORTHO05D010646 7.7e-11 74.3 102 41.2
Actinidia38104 Actinidia chinensis HOM05D008231 ORTHO05D023294 8.5e-10 70.9 313 24.9
Actinidia23403 Actinidia chinensis HOM05D062810 ORTHO05D010646 2.5e-09 69.3 99 43.4
FAN09G1797 Fragaria x ananassa HOM05D000466 ORTHO05D000331 5.1e-07 61.6 156 28.8
FvH4_6g45390 Fragaria vesca HOM05D000466 ORTHO05D000331 2.0e-06 59.7 142 31.0
FAN14G0952 Fragaria x ananassa HOM05D000466 ORTHO05D000331 2.0e-06 59.7 142 31.0
FAN14G1763 Fragaria x ananassa HOM05D000466 ORTHO05D000331 2.0e-06 59.7 142 31.0
RcHm_v2.0_Chr2g0163201 Rosa chinensis HOM05D000466 ORTHO05D000331 2.6e-06 59.3 117 33.3
DCAR_008572 Daucus carota HOM05D000466 ORTHO05D000331 3.3e-06 58.9 107 34.6
DCAR_009129 Daucus carota HOM05D000466 ORTHO05D000331 3.3e-06 58.9 107 34.6


User provided reference genes

Program Settings