Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 6.7e-88 327.4 176 100.0
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 2.5e-58 229.2 205 66.8
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 4.3e-50 201.8 179 67.0
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 8.9e-48 194.1 177 67.8
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 3.5e-44 182.2 180 61.1
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 4.6e-44 181.8 150 70.0
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.0e-43 180.6 179 59.2
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.5e-42 176.0 176 59.1
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 5.6e-42 174.9 187 57.2
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 7.3e-42 174.5 176 59.1
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 9.5e-42 174.1 178 57.3
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 1.1e-40 170.6 147 61.9
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.1e-40 170.6 171 59.6
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 1.1e-40 170.6 179 57.0
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 1.8e-40 169.9 162 61.1
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 1.8e-40 169.9 180 55.0
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 1.8e-40 169.9 170 57.6
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 6.8e-40 167.9 158 58.2
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 3.4e-39 165.6 180 59.4
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 9.9e-39 164.1 190 53.7
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 1.3e-38 163.7 177 54.8
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 2.2e-38 162.9 161 59.0
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 2.2e-38 162.9 180 55.6
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 2.2e-38 162.9 166 60.2
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 8.3e-38 161.0 162 57.4
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.1e-37 160.6 173 56.6
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.9e-37 159.8 181 53.6
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 2.4e-37 159.5 176 55.1
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 3.2e-37 159.1 164 57.3
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.1e-37 157.9 180 52.8
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.7e-36 156.0 180 52.2
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.0e-35 154.1 182 52.7
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 1.3e-35 153.7 170 52.4
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.3e-35 153.7 149 59.7
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 3.9e-35 152.1 166 53.6
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 3.9e-35 152.1 176 54.0
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 3.3e-34 149.1 173 50.9
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 3.3e-34 149.1 174 52.3
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.3e-34 149.1 177 53.1
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.3e-34 149.1 149 58.4
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 5.6e-34 148.3 141 58.9
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 9.5e-34 147.5 166 54.2
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.5e-34 147.5 177 53.1
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 1.2e-33 147.1 153 51.6
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 1.2e-33 147.1 141 58.2
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 8.1e-33 144.4 195 47.7
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 2.4e-32 142.9 149 57.0
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 3.1e-32 142.5 115 65.2
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 6.8e-32 141.4 165 51.5
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.2e-31 140.6 147 55.1
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.6e-31 139.4 173 49.7
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 3.4e-31 139.0 179 48.6
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 3.4e-31 139.0 175 48.0
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 4.4e-31 138.7 180 51.1
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 5.8e-31 138.3 116 62.9
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 5.8e-31 138.3 147 59.2
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 5.8e-31 138.3 162 57.4
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 9.9e-31 137.5 130 63.8
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 4.9e-30 135.2 193 49.2
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 4.9e-30 135.2 162 49.4
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 6.4e-30 134.8 113 63.7
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 6.4e-30 134.8 147 51.0
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 1.1e-29 134.0 103 66.0
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 2.4e-29 132.9 127 59.1
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 3.2e-29 132.5 173 50.9
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.2e-29 132.5 178 46.1
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 3.2e-29 132.5 175 47.4
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 3.2e-29 132.5 158 54.4
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 7.1e-29 131.3 127 60.6
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.2e-28 130.6 188 48.9
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.2e-28 130.6 188 48.9
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 2.7e-28 129.4 166 50.0
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 4.6e-28 128.6 179 44.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 6.0e-28 128.3 172 50.0
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.3e-27 127.1 174 50.0
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 1.7e-27 126.7 121 62.8
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 1.7e-27 126.7 113 58.4
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 6.6e-27 124.8 180 45.6
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 8.7e-27 124.4 161 46.0
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 1.1e-26 124.0 178 46.1
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.5e-26 123.6 159 53.5
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 1.9e-26 123.2 120 55.0
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.5e-26 122.9 162 46.9
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 3.3e-26 122.5 103 61.2
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 4.3e-26 122.1 118 61.9
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.4e-24 117.1 213 42.3
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 4.0e-24 115.5 114 55.3
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.5e-23 113.6 131 56.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 6.2e-17 91.7 56 82.1
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 1.1e-16 90.9 109 53.2
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 1.4e-16 90.5 98 54.1
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 4.0e-16 89.0 56 78.6
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 2.6e-15 86.3 118 48.3
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 3.0e-11 72.8 55 67.3
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.0e-11 72.8 145 40.0
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 9.6e-10 67.8 100 45.0
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 1.5e-07 60.5 67 47.8
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 2.6e-07 59.7 102 40.2
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.9e-06 56.2 91 35.2
Cre16.g687200 Chlamydomonas reinhardtii HOM05D007485 ORTHO05D009437 3.8e-06 55.8 131 32.8


User provided reference genes

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