Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.1e-126 455.7 221 100.0
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.6e-70 270.0 210 68.6
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.2e-27 126.7 140 46.4
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.0e-24 116.3 152 42.8
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 3.9e-24 115.9 160 41.2
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.8e-21 105.1 171 41.5
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 4.4e-20 102.4 156 39.7
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 4.4e-20 102.4 165 40.0
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.5e-20 101.7 123 46.3
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.7e-19 100.5 131 44.3
vmacro05103 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 6.4e-19 98.6 179 38.0
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.1e-18 95.9 145 40.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 7.8e-17 91.7 139 39.6
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 1.3e-16 90.9 158 33.5
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.3e-16 90.9 137 43.1
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-16 90.1 130 38.5
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.9e-16 89.4 151 37.1
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.1e-16 89.0 141 37.6
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.9e-15 87.0 154 40.3
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 2.5e-15 86.7 127 41.7
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.3e-15 85.1 119 42.9
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.6e-14 84.0 124 41.1
vmacro11249 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 6.2e-14 82.0 152 32.9
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.0e-13 79.3 152 32.9
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 5.2e-13 79.0 181 35.9
Lj1A798T44 Lonicera japonica HOM05D011954 ORTHO05D014236 6.8e-13 78.6 124 37.9
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.9e-13 78.2 142 37.3
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 2.0e-12 77.0 110 37.3
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.0e-12 77.0 129 38.8
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 2.6e-12 76.6 154 35.7
Rhsim13G0218900 Rhododendron simsii HOM05D030440 ORTHO05D338800 9.9e-12 74.7 171 29.8
PGSC0003DMG400006632 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.3e-11 74.3 139 37.4
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.9e-11 73.2 115 38.3
Rhsim06G0060500 Rhododendron simsii HOM05D031946 ORTHO05D007789 4.9e-11 72.4 157 29.3
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.4e-11 71.6 129 37.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.4e-10 70.9 116 39.7
Rhsim10G0158100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.9e-10 70.5 123 33.3
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 5.4e-10 68.9 139 34.5
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 7.1e-10 68.6 129 35.7
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 7.1e-10 68.6 124 37.1
Sopen02g016420 Solanum pennellii HOM05D010354 ORTHO05D012840 7.1e-10 68.6 129 36.4
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 9.2e-10 68.2 116 37.9
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 1.6e-09 67.4 130 33.8
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 2.1e-09 67.0 156 30.1
Rhsim13G0218700 Rhododendron simsii HOM05D030440 ORTHO05D007789 2.7e-09 66.6 120 34.2
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 3.5e-09 66.2 121 33.1
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.0e-09 65.5 107 38.3
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 7.8e-09 65.1 121 34.7
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 7.8e-09 65.1 110 38.2
Rhsim06G0172100 Rhododendron simsii HOM05D000032 ORTHO05D009914 1.3e-08 64.3 130 30.8
Rhsim06G0209600 Rhododendron simsii HOM05D030440 ORTHO05D007789 1.3e-08 64.3 156 25.6
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.7e-08 63.9 123 34.1
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.3e-08 63.5 112 37.5
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 2.3e-08 63.5 125 34.4
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 3.0e-08 63.2 120 34.2
Cc02_g14140 Coffea canephora HOM05D039367 ORTHO05D044651 3.9e-08 62.8 129 34.9
Cc02_g14170 Coffea canephora HOM05D039367 ORTHO05D044651 3.9e-08 62.8 129 34.9
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 3.9e-08 62.8 141 34.0
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 3.9e-08 62.8 104 35.6
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 5.1e-08 62.4 121 33.9
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 5.1e-08 62.4 137 34.3
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 6.6e-08 62.0 93 36.6
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 8.6e-08 61.6 139 32.4
Sed0023023 Sechium edule HOM05D008623 ORTHO05D007789 1.5e-07 60.8 124 34.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-07 60.1 111 32.4
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.5e-07 60.1 111 32.4
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 3.3e-07 59.7 125 32.8
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 5.6e-07 58.9 100 37.0
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 5.6e-07 58.9 100 37.0
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 7.3e-07 58.5 128 35.2
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 7.3e-07 58.5 139 30.9
arahy.Tifrunner.gnm1.ann1.IT7CRT Arachis hypogaea HOM05D010841 ORTHO05D007789 9.6e-07 58.2 109 37.6
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 9.6e-07 58.2 160 32.5
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 9.6e-07 58.2 126 31.7
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.6e-06 57.4 112 34.8
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 1.6e-06 57.4 108 36.1
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.6e-06 57.4 120 30.8
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 2.1e-06 57.0 141 31.9
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 2.1e-06 57.0 90 37.8
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.1e-06 57.0 120 31.7
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-06 56.6 99 33.3
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-06 56.6 106 32.1
CAN.G1522.9 Capsicum annuum HOM05D010354 ORTHO05D012840 2.8e-06 56.6 115 32.2
Lj1A773T41 Lonicera japonica HOM05D011954 ORTHO05D014236 2.8e-06 56.6 111 35.1
Nitab4.5_0004672g0020 Nicotiana tabacum HOM05D010354 ORTHO05D012840 2.8e-06 56.6 129 34.9
arahy.Tifrunner.gnm1.ann1.UYW4TV Arachis hypogaea HOM05D010841 ORTHO05D007789 3.6e-06 56.2 109 36.7
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.6e-06 56.2 122 34.4
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 3.6e-06 56.2 111 34.2
Solyc06g073587.1 Solanum lycopersicum HOM05D000519 ORTHO05D019510 3.6e-06 56.2 78 39.7
Solyc06g150133.1 Solanum lycopersicum HOM05D000519 ORTHO05D019510 3.6e-06 56.2 78 39.7
Sopen08g001170 Solanum pennellii HOM05D010354 ORTHO05D012840 3.6e-06 56.2 125 35.2
vmacro07499 Vaccinium macrocarpon HOM05D004109 ORTHO05D426741 3.6e-06 56.2 64 43.8
vmacro16067 Vaccinium macrocarpon HOM05D028256 ORTHO05D000283 3.6e-06 56.2 101 37.6
PGSC0003DMG400005950 Solanum tuberosum HOM05D000519 ORTHO05D019510 4.7e-06 55.8 99 34.3
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 6.2e-06 55.5 121 33.9
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.2e-06 55.5 90 34.4
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 6.2e-06 55.5 102 34.3
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 6.2e-06 55.5 114 35.1
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 8.1e-06 55.1 121 33.9
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.1e-06 55.1 138 30.4


User provided reference genes

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