Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 6.8e-187 657.1 325 100.0
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 6.5e-145 517.7 333 79.3
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 8.5e-121 437.6 330 70.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 8.5e-113 411.0 327 65.1
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.4e-110 403.7 325 64.3
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.2e-109 400.6 325 64.3
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.6e-109 399.4 321 64.2
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 7.5e-109 397.9 322 62.4
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 2.7e-106 389.4 324 63.3
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.3e-105 386.3 327 62.1
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.3e-105 386.3 327 62.1
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 6.6e-105 384.8 327 61.8
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 6.6e-105 384.8 331 63.1
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.1e-104 384.0 315 62.2
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.9e-104 383.3 324 62.3
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 4.3e-104 382.1 318 62.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.6e-104 381.7 340 59.4
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 9.5e-104 380.9 328 61.9
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-103 380.6 360 58.9
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.4e-102 377.1 321 61.1
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 2.3e-102 376.3 319 59.6
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 8.9e-102 374.4 314 60.2
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 8.9e-102 374.4 329 59.6
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.2e-101 374.0 305 61.6
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.5e-101 373.6 321 60.1
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 4.4e-101 372.1 360 56.7
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.9e-100 369.4 320 60.3
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 4.9e-100 368.6 325 58.8
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 6.4e-100 368.2 304 60.9
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 6.4e-100 368.2 363 55.1
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 2.4e-99 366.3 292 64.0
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 2.3e-97 359.8 248 72.2
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 9.5e-96 354.4 265 66.0
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-93 347.1 312 56.7
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 2.6e-93 346.3 326 56.4
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 2.6e-93 346.3 310 59.0
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.6e-93 346.3 312 57.1
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.6e-93 346.3 312 56.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 4.9e-92 342.0 327 55.4
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 6.4e-92 341.7 321 56.4
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 8.3e-92 341.3 314 56.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 8.3e-92 341.3 313 56.9
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.4e-91 340.5 324 54.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 7.8e-90 334.7 321 54.8
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.0e-89 334.3 313 55.9
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 8.6e-89 331.3 327 53.5
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.5e-88 330.5 292 56.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 5.6e-88 328.6 325 52.6
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 7.3e-88 328.2 291 57.0
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.1e-86 324.3 325 53.5
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.8e-86 323.6 293 54.9
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.1e-86 322.8 304 53.9
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 3.1e-86 322.8 295 55.9
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 8.9e-86 321.2 246 63.0
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 2.6e-85 319.7 269 61.0
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 4.4e-85 318.9 292 56.5
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 5.8e-85 318.5 326 50.3
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 7.5e-85 318.2 321 52.0
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.7e-84 317.0 288 56.2
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.2e-84 316.6 265 59.2
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 3.7e-84 315.8 311 54.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 8.3e-84 314.7 299 53.5
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 8.3e-84 314.7 364 48.1
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.1e-83 314.3 364 46.7
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.9e-83 313.5 265 56.2
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 5.4e-83 312.0 317 52.4
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 9.2e-83 311.2 320 51.2
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.6e-82 310.5 286 53.1
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.5e-82 309.3 315 52.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.6e-82 308.9 324 52.5
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 4.6e-82 308.9 328 50.9
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.3e-81 307.4 300 53.3
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.3e-81 307.4 334 49.7
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.7e-81 307.0 295 54.6
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.7e-81 307.0 315 52.4
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 3.0e-81 306.2 298 52.7
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 3.0e-81 306.2 278 55.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.1e-80 304.3 321 50.2
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 5.6e-80 302.0 335 49.3
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 7.3e-80 301.6 292 51.7
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 9.5e-80 301.2 318 50.0
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 9.5e-80 301.2 293 53.6
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.2e-79 300.8 301 52.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 2.8e-79 299.7 333 48.9
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 2.8e-79 299.7 333 48.9
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.1e-78 297.7 297 54.2
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 8.9e-78 294.7 270 56.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 2.6e-77 293.1 220 65.0
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 2.2e-76 290.0 274 55.8
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.2e-76 290.0 284 54.9
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 6.4e-76 288.5 312 48.1
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.1e-71 273.5 284 50.0
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 7.8e-66 255.0 279 50.5
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.3e-60 237.7 297 43.8
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 7.1e-59 231.9 297 44.4
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.6e-58 230.7 243 50.2
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 5.1e-49 199.1 161 64.6
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 7.9e-42 175.3 131 61.8
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.9e-40 170.6 316 37.0
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.2e-37 161.4 151 55.6
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.3e-31 141.4 120 55.8
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.2e-29 134.8 269 34.2
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.6e-29 133.7 135 51.9
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.9e-27 127.5 248 33.1
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 9.7e-24 115.2 85 63.5
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 2.8e-23 113.6 85 62.4
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.4e-22 111.3 127 47.2
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 4.5e-21 106.3 85 58.8
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.2e-18 98.2 142 40.1
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 8.5e-12 75.5 72 51.4
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 3.2e-11 73.6 63 57.1
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 7.2e-11 72.4 113 39.8
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 3.0e-09 67.0 322 25.8
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 7.5e-08 62.4 53 52.8
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 3.7e-07 60.1 227 26.4


User provided reference genes

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