Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.3e-154 547.4 269 100.0
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.7e-138 496.1 269 88.5
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.0e-135 486.9 292 82.5
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 3.9e-135 485.0 292 80.8
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 5.0e-135 484.6 292 80.8
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.3e-134 481.9 292 81.5
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.6e-133 479.6 291 81.1
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 2.1e-133 479.2 292 80.1
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 6.2e-133 477.6 292 80.8
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 8.0e-133 477.2 292 80.1
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 8.0e-133 477.2 292 80.5
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.4e-132 476.5 292 80.5
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 1.8e-132 476.1 292 80.1
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.3e-132 475.7 288 80.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 4.0e-132 474.9 288 80.2
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 4.0e-132 474.9 288 80.2
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 8.9e-132 473.8 292 80.1
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 8.9e-132 473.8 292 79.5
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.2e-131 473.4 292 79.1
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.5e-131 473.0 292 79.5
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 3.4e-131 471.9 280 82.1
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 3.4e-131 471.9 292 79.5
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.4e-131 471.9 292 79.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 3.4e-131 471.9 292 78.8
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.4e-131 471.9 294 79.6
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 4.4e-131 471.5 292 78.8
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 4.4e-131 471.5 272 87.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 9.8e-131 470.3 292 78.8
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.3e-130 469.9 292 79.8
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-130 469.5 292 78.8
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 2.2e-130 469.2 292 79.8
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.9e-130 468.8 292 78.8
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 4.9e-130 468.0 292 79.1
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 4.9e-130 468.0 292 78.1
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 6.4e-130 467.6 290 79.7
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 8.3e-130 467.2 290 78.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 1.1e-129 466.8 290 78.3
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.4e-129 466.5 289 79.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 2.4e-129 465.7 292 77.7
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 2.4e-129 465.7 285 80.4
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 3.2e-129 465.3 292 77.7
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 5.4e-129 464.5 285 80.0
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 5.4e-129 464.5 292 78.4
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 7.0e-129 464.2 292 78.1
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.6e-128 463.0 289 78.2
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.6e-128 463.0 292 78.8
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.0e-128 462.6 292 77.7
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.0e-128 462.6 290 77.6
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.7e-128 462.2 292 76.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.7e-128 462.2 292 76.7
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.7e-128 462.2 292 78.1
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 4.6e-128 461.5 292 78.1
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.6e-128 461.5 292 78.1
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.3e-127 459.1 321 71.0
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.3e-127 459.1 290 77.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.3e-127 459.1 290 76.9
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.0e-127 458.8 292 77.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 3.9e-127 458.4 290 77.2
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 5.0e-127 458.0 288 77.4
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 8.6e-127 457.2 287 78.0
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 8.6e-127 457.2 287 78.0
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.1e-126 456.8 292 76.4
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-126 456.8 292 76.7
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.5e-126 455.7 289 77.9
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 2.5e-126 455.7 292 75.3
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 4.3e-126 454.9 288 76.7
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 5.6e-126 454.5 288 76.0
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.1e-125 452.6 288 76.0
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.8e-125 452.2 292 74.7
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 2.8e-125 452.2 290 76.9
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.6e-125 451.8 289 76.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 3.6e-125 451.8 292 74.3
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.6e-125 451.8 292 77.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.7e-125 451.4 288 74.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.1e-124 448.7 290 74.5
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 3.1e-124 448.7 284 77.8
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.2e-124 448.0 292 73.6
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.2e-124 448.0 292 73.6
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 5.2e-124 448.0 293 75.1
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 6.8e-124 447.6 292 74.0
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 6.8e-124 447.6 291 75.3
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.2e-123 446.8 290 75.9
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.5e-123 446.4 292 73.6
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.5e-123 446.4 292 73.3
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 2.0e-123 446.0 292 73.3
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.6e-123 445.7 292 73.6
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 3.4e-123 445.3 292 73.3
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 3.4e-123 445.3 292 72.9
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.3e-122 443.4 292 72.6
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.3e-122 443.4 292 72.6
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.7e-122 443.0 292 72.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.7e-122 443.0 292 72.6
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.7e-122 443.0 281 78.3
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.9e-122 442.2 287 76.3
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.3e-122 440.7 287 73.2
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 5.4e-121 438.0 291 73.5
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 9.2e-121 437.2 290 72.1
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 3.0e-119 432.2 289 72.7
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.5e-118 429.1 274 78.1
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 4.3e-118 428.3 290 71.4
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.5e-118 427.2 278 76.3
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.4e-116 423.3 272 77.6
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.8e-116 422.9 255 80.0
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.3e-116 422.5 289 72.7
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 3.1e-116 422.2 313 70.3
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 2.6e-115 419.1 273 76.9
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 6.4e-114 414.5 294 68.4
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-113 413.7 292 72.3
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.9e-113 412.9 289 68.9
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 8.4e-106 387.5 287 65.5
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 2.7e-104 382.5 309 62.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 6.0e-104 381.3 227 80.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.0e-103 379.0 288 64.2
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.1e-102 377.1 282 63.8
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.8e-101 371.7 273 66.3
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.8e-100 369.8 271 68.3
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 6.4e-98 361.3 268 65.7
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 1.4e-92 343.6 283 58.3
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.1e-89 334.0 321 59.5
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.8e-87 326.6 190 83.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 9.6e-86 320.9 186 83.9
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.8e-85 318.5 183 85.2
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.4e-76 290.4 173 81.5
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.4e-73 280.4 295 50.8
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.1e-70 270.8 297 50.5
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.5e-70 270.4 286 48.3
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.5e-62 243.8 188 64.9
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 9.7e-62 241.1 141 81.6
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 5.0e-58 228.8 290 41.7
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.3e-55 219.9 226 54.9
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.7e-54 214.5 226 54.0
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.4e-46 189.1 312 40.4
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-44 184.5 101 87.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-44 183.3 102 85.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.8e-42 176.0 97 86.6
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 1.2e-32 144.4 106 67.9
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 2.4e-28 130.2 76 81.6
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.3e-25 119.4 166 43.4
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.3e-23 113.6 97 63.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 6.8e-07 58.9 40 75.0


User provided reference genes

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