Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 3.5e-149 531.6 262 100.0
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.8e-65 253.4 256 57.8
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 2.7e-64 249.6 256 57.4
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 2.9e-63 246.1 263 53.2
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 5.0e-63 245.4 255 55.3
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.5e-62 243.8 260 54.6
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.5e-62 243.8 260 54.6
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 3.2e-62 242.7 256 56.2
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.2e-62 242.7 257 55.6
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 3.2e-62 242.7 258 55.4
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 3.2e-62 242.7 258 55.4
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.2e-62 242.7 260 54.2
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 3.2e-62 242.7 259 54.1
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 9.4e-62 241.1 258 53.1
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.2e-61 240.7 258 55.0
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 1.2e-61 240.7 256 54.7
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 1.6e-61 240.4 257 55.3
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 2.1e-61 240.0 257 55.3
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 2.7e-61 239.6 258 53.9
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.6e-61 239.2 255 55.7
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 3.6e-61 239.2 256 54.3
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 4.7e-61 238.8 258 53.9
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 6.1e-61 238.4 259 52.5
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 8.0e-61 238.0 260 52.3
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 8.0e-61 238.0 259 52.1
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 1.0e-60 237.7 255 53.7
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 1.0e-60 237.7 258 52.7
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 1.4e-60 237.3 255 53.7
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 1.4e-60 237.3 256 53.9
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.8e-60 236.9 258 53.5
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 4.0e-60 235.7 255 53.3
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 4.0e-60 235.7 259 52.9
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 4.0e-60 235.7 257 53.3
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 4.0e-60 235.7 257 54.1
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 6.8e-60 235.0 259 52.1
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 8.8e-60 234.6 257 53.7
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 8.8e-60 234.6 259 51.7
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 1.2e-59 234.2 259 52.5
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 1.2e-59 234.2 258 52.3
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 1.5e-59 233.8 258 52.7
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 2.6e-59 233.0 255 52.9
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 2.6e-59 233.0 255 52.9
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 3.4e-59 232.6 259 52.1
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 3.4e-59 232.6 256 52.7
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 3.4e-59 232.6 259 52.5
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 3.4e-59 232.6 259 51.7
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 3.4e-59 232.6 259 51.7
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 4.4e-59 232.3 256 52.7
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 4.4e-59 232.3 255 52.9
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 4.4e-59 232.3 256 53.1
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 4.4e-59 232.3 259 51.7
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 4.4e-59 232.3 259 52.1
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 7.5e-59 231.5 259 51.7
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 9.8e-59 231.1 256 52.3
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 1.3e-58 230.7 256 52.3
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.3e-58 230.7 256 52.0
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 1.3e-58 230.7 259 51.0
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.7e-58 230.3 256 52.0
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 1.7e-58 230.3 256 52.7
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 1.7e-58 230.3 258 51.9
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.7e-58 230.3 256 51.2
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 2.2e-58 229.9 256 52.7
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 2.2e-58 229.9 256 52.7
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 2.2e-58 229.9 258 52.3
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 2.2e-58 229.9 256 52.3
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 2.8e-58 229.6 256 52.3
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 3.7e-58 229.2 257 52.5
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 3.7e-58 229.2 258 52.3
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 4.8e-58 228.8 256 52.3
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 6.3e-58 228.4 255 52.2
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 6.3e-58 228.4 255 52.2
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 1.4e-57 227.3 258 51.6
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 1.8e-57 226.9 255 52.2
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 5.4e-57 225.3 256 52.3
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 1.2e-56 224.2 259 51.0
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 1.6e-56 223.8 256 52.0
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 1.6e-56 223.8 259 51.7
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 2.0e-56 223.4 259 51.7
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 4.5e-56 222.2 255 51.8
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 5.9e-56 221.9 256 50.8
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 5.9e-56 221.9 255 51.8
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.3e-55 220.7 255 49.8
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 1.7e-55 220.3 255 51.4
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 1.7e-55 220.3 255 49.8
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 1.7e-55 220.3 255 49.4
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 3.8e-55 219.2 259 50.2
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 5.0e-55 218.8 259 49.4
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 6.6e-55 218.4 255 49.8
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.1e-54 217.6 257 49.4
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 1.1e-54 217.6 255 50.2
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.5e-54 217.2 259 49.8
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 1.9e-54 216.9 252 50.8
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 1.9e-54 216.9 251 51.0
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 4.2e-54 215.7 255 49.4
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.2e-53 214.2 255 48.2
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 1.6e-53 213.8 259 47.9
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 2.1e-53 213.4 258 48.1
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 4.7e-53 212.2 249 49.4
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 6.1e-53 211.8 249 49.4
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 6.1e-53 211.8 255 47.8
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 7.5e-51 204.9 251 48.6
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 7.5e-51 204.9 254 46.9
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 8.3e-50 201.4 255 48.2
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 1.3e-47 194.1 256 45.3
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 2.3e-47 193.4 258 43.8
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 4.7e-45 185.7 251 44.6
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 5.2e-44 182.2 255 43.9
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 1.1e-41 174.5 209 50.7
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 7.0e-41 171.8 257 41.2
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 6.6e-39 165.2 258 39.5
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 1.4e-36 157.5 214 44.9
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 5.2e-36 155.6 207 46.4
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 1.5e-35 154.1 257 37.7
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 9.8e-35 151.4 255 39.2
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 1.2e-32 144.4 75 90.7
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 1.9e-30 137.1 245 39.6
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.5e-30 136.7 210 41.9
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 9.5e-30 134.8 74 82.4
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 1.8e-28 130.6 74 81.1
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 8.9e-28 128.3 89 70.8
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 4.4e-27 125.9 85 69.4
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.1e-21 107.1 255 32.5
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 4.0e-20 102.8 65 73.8
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 5.1e-15 85.9 198 35.4
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 7.3e-14 82.0 46 78.3
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 7.1e-09 65.5 255 28.2


User provided reference genes

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