Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0182000 Rhododendron simsii HOM05D002931 ORTHO05D003273 2.5e-84 315.5 163 100.0
Rhsim03G0246600 Rhododendron simsii HOM05D002931 ORTHO05D003273 2.1e-51 206.1 131 86.3
Rhsim03G0246800 Rhododendron simsii HOM05D002931 ORTHO05D003273 4.0e-42 175.3 111 86.5
Actinidia07433 Actinidia chinensis HOM05D002931 ORTHO05D003273 2.3e-26 122.9 133 57.9
Actinidia26402 Actinidia chinensis HOM05D002931 ORTHO05D003273 4.4e-25 118.6 133 57.9
CSS0021369 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.8e-24 115.9 126 61.1
CSS0048152 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 2.8e-24 115.9 126 61.1
Dinv41530 Davidia involucrata HOM05D002931 ORTHO05D003273 1.2e-22 110.5 133 53.4
Rhsim03G0246700 Rhododendron simsii HOM05D002931 ORTHO05D003273 1.3e-21 107.1 63 92.1
Dinv36544 Davidia involucrata HOM05D002931 ORTHO05D003273 3.9e-21 105.5 131 51.9
vmacro06178 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 5.2e-18 95.1 56 85.7
Cfa003349 Carpinus fangiana HOM05D002931 ORTHO05D003273 3.0e-13 79.3 131 43.5
Ciclev10007946m.g Citrus clementina HOM05D002931 ORTHO05D003273 3.9e-13 79.0 131 42.0
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 3.3e-12 75.9 131 42.7
TAR625G1122 Trochodendron aralioides HOM05D002931 ORTHO05D003273 5.6e-12 75.1 134 40.3
Manes.06G049800 Manihot esculenta HOM05D002931 ORTHO05D003273 1.2e-11 73.9 117 41.9
CSS0026205 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 4.7e-11 72.0 131 39.7
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 6.2e-11 71.6 131 41.2
COL.COLO4_05773 Corchorus olitorius HOM05D002931 ORTHO05D003273 6.2e-11 71.6 122 41.8
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 1.4e-10 70.5 133 41.4
Peaxi162Scf00984g00118 Petunia axillaris HOM05D002931 ORTHO05D003273 3.1e-10 69.3 131 41.2
Duzib150G1215 Durio zibethinus HOM05D002931 ORTHO05D003273 6.8e-10 68.2 131 39.7
Thecc.09G123400 Theobroma cacao HOM05D002931 ORTHO05D003273 6.8e-10 68.2 122 39.3
TWI34G0601 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 8.9e-10 67.8 129 38.0
GSVIVG01015505001 Vitis vinifera HOM05D002931 ORTHO05D003273 2.0e-09 66.6 98 45.9
QL02p087842 Quercus lobata HOM05D002931 ORTHO05D003273 5.8e-09 65.1 131 37.4
Duzib168G0426 Durio zibethinus HOM05D002931 ORTHO05D003273 1.3e-08 63.9 131 37.4
RcHm_v2.0_Chr2g0089101 Rosa chinensis HOM05D002931 ORTHO05D003273 8.3e-08 61.2 130 39.2
Nn8g39392 Nelumbo nucifera HOM05D002931 ORTHO05D003273 9.2e-07 57.8 172 35.5
Gohir.A13G199300 Gossypium hirsutum HOM05D002931 ORTHO05D003273 1.2e-06 57.4 125 34.4
Lj4g0003419 Lotus japonicus HOM05D002931 ORTHO05D003273 1.6e-06 57.0 126 34.9
Sopen12g002560 Solanum pennellii HOM05D002931 ORTHO05D003273 1.6e-06 57.0 132 38.6
Gohir.D13G204800 Gossypium hirsutum HOM05D002931 ORTHO05D003273 3.5e-06 55.8 134 34.3
Gorai.013G233700 Gossypium raimondii HOM05D002931 ORTHO05D003273 3.5e-06 55.8 134 34.3
MBI04_g07629_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 7.8e-06 54.7 138 36.2


User provided reference genes

Program Settings