Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0175700 Rhododendron simsii HOM05D000192 ORTHO05D000123 1.3e-131 473.0 231 100.0
Rhsim08G0243300 Rhododendron simsii HOM05D005139 ORTHO05D006125 9.6e-42 174.5 101 86.1
Rhsim10G0204300 Rhododendron simsii HOM05D000192 ORTHO05D000123 6.0e-28 128.6 84 79.8
Rhsim10G0203400 Rhododendron simsii HOM05D000192 ORTHO05D000123 2.5e-26 123.2 84 76.2
vmacro20509 Vaccinium macrocarpon HOM05D000192 ORTHO05D000123 3.3e-18 96.3 113 53.1
vmacro20508 Vaccinium macrocarpon HOM05D000192 ORTHO05D000123 3.2e-13 79.7 105 48.6
TWI09G0500 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 5.1e-11 72.4 77 46.8
TWI73G0614 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 8.7e-11 71.6 77 45.5
Lj2C490T3 Lonicera japonica HOM05D000192 ORTHO05D000123 1.5e-10 70.9 106 41.5
MD15G1234800 Malus domestica HOM05D000192 ORTHO05D000123 3.3e-10 69.7 94 45.7
GSVIVG01004310001 Vitis vinifera HOM05D000192 ORTHO05D000123 4.3e-10 69.3 113 37.2
Lj2C489T9 Lonicera japonica HOM05D000192 ORTHO05D000123 5.7e-10 68.9 106 40.6
Lj2C489T15 Lonicera japonica HOM05D000192 ORTHO05D000123 7.4e-10 68.6 107 40.2
GSVIVG01007246001 Vitis vinifera HOM05D000192 ORTHO05D000123 7.4e-10 68.6 113 37.2
Lj2C489T10 Lonicera japonica HOM05D000192 ORTHO05D000123 1.6e-09 67.4 107 40.2
Thecc.01G008800 Theobroma cacao HOM05D000192 ORTHO05D000123 1.6e-09 67.4 78 48.7
Ciclev10027282m.g Citrus clementina HOM05D000192 ORTHO05D000123 3.7e-09 66.2 86 45.3
DCAR_027626 Daucus carota HOM05D000192 ORTHO05D000123 3.7e-09 66.2 97 44.3
Lj2C489T11 Lonicera japonica HOM05D000192 ORTHO05D000123 3.7e-09 66.2 107 40.2
Lj2C490T2 Lonicera japonica HOM05D000192 ORTHO05D000123 4.8e-09 65.9 107 39.3
Lj4C230T10 Lonicera japonica HOM05D000192 ORTHO05D000123 6.3e-09 65.5 97 38.1
Potri.005G103700 Populus trichocarpa HOM05D000192 ORTHO05D000123 8.2e-09 65.1 89 43.8
Thecc.01G008900 Theobroma cacao HOM05D000192 ORTHO05D000123 8.2e-09 65.1 106 35.8
CiPaw.08G180200 Carya illinoinensis HOM05D000192 ORTHO05D000123 1.1e-08 64.7 77 44.2
DCAR_027628 Daucus carota HOM05D000192 ORTHO05D000123 1.1e-08 64.7 75 49.3
COL.COLO4_22518 Corchorus olitorius HOM05D000192 ORTHO05D000123 1.4e-08 64.3 81 45.7
Prupe.7G178200 Prunus persica HOM05D000192 ORTHO05D000123 1.4e-08 64.3 94 41.5
Lj2C489T14 Lonicera japonica HOM05D000192 ORTHO05D000123 1.8e-08 63.9 108 38.0
Actinidia22920 Actinidia chinensis HOM05D000192 ORTHO05D000123 2.4e-08 63.5 75 48.0
Cfa007048 Carpinus fangiana HOM05D000192 ORTHO05D000123 2.4e-08 63.5 75 45.3
Lj4C230T2 Lonicera japonica HOM05D000192 ORTHO05D000123 2.4e-08 63.5 85 42.4
MD02G1121000 Malus domestica HOM05D000192 ORTHO05D000123 2.4e-08 63.5 77 48.1
Lj4C230T3 Lonicera japonica HOM05D000192 ORTHO05D000123 3.1e-08 63.2 97 38.1
Potri.005G103600 Populus trichocarpa HOM05D000192 ORTHO05D000123 3.1e-08 63.2 78 47.4
Lj4C230T12 Lonicera japonica HOM05D000192 ORTHO05D000123 4.1e-08 62.8 85 41.2
Lj4C230T4 Lonicera japonica HOM05D000192 ORTHO05D000123 4.1e-08 62.8 97 39.2
GSVIVG01007431001 Vitis vinifera HOM05D000192 ORTHO05D000123 4.1e-08 62.8 77 44.2
Cc07_g11530 Coffea canephora HOM05D000192 ORTHO05D000123 5.3e-08 62.4 113 32.7
Dinv40164 Davidia involucrata HOM05D000192 ORTHO05D000123 9.0e-08 61.6 106 39.6
Duzib147G0483 Durio zibethinus HOM05D000192 ORTHO05D000123 9.0e-08 61.6 92 39.1
Lj2C489T12 Lonicera japonica HOM05D000192 ORTHO05D000123 1.2e-07 61.2 105 35.2
Lj4A230T50 Lonicera japonica HOM05D000192 ORTHO05D000123 1.2e-07 61.2 96 36.5
Gohir.D11G177850 Gossypium hirsutum HOM05D000192 ORTHO05D000123 1.5e-07 60.8 92 43.5
Hma1.2p1_0552F.1_g177620 Hydrangea macrophylla HOM05D000192 ORTHO05D000123 1.5e-07 60.8 84 40.5
GSVIVG01007433001 Vitis vinifera HOM05D000192 ORTHO05D000123 1.5e-07 60.8 84 40.5
Gorai.007G189700 Gossypium raimondii HOM05D000192 ORTHO05D000123 2.0e-07 60.5 92 43.5
CSS0007729 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 2.6e-07 60.1 95 42.1
Duzib187G1975 Durio zibethinus HOM05D000192 ORTHO05D000123 2.6e-07 60.1 81 44.4
FAN23G0911 Fragaria x ananassa HOM05D000192 ORTHO05D000123 2.6e-07 60.1 94 41.5
MD02G1120800 Malus domestica HOM05D000192 ORTHO05D000123 2.6e-07 60.1 108 38.0
FAN28G2601 Fragaria x ananassa HOM05D000192 ORTHO05D000123 3.4e-07 59.7 83 43.4
ECA238G3363 Erigeron canadensis HOM05D000192 ORTHO05D000123 5.9e-07 58.9 119 35.3
FvH4_1g10710 Fragaria vesca HOM05D000192 ORTHO05D000123 5.9e-07 58.9 94 40.4
FAN19G0711 Fragaria x ananassa HOM05D000192 ORTHO05D000123 5.9e-07 58.9 94 40.4
FAN26G2003 Fragaria x ananassa HOM05D000192 ORTHO05D000123 5.9e-07 58.9 88 40.9
FAN23G1507 Fragaria x ananassa HOM05D000192 ORTHO05D000123 7.7e-07 58.5 94 40.4
GSVIVG01007245001 Vitis vinifera HOM05D000192 ORTHO05D000123 7.7e-07 58.5 69 42.0
CSS0034862 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 1.0e-06 58.2 67 47.8
Gohir.A11G170600 Gossypium hirsutum HOM05D000192 ORTHO05D000123 1.0e-06 58.2 97 38.1
MBI05_g38846_MAGBIO Magnolia biondii HOM05D000192 ORTHO05D000123 1.0e-06 58.2 112 31.2
GSVIVG01002913001 Vitis vinifera HOM05D000192 ORTHO05D000123 1.0e-06 58.2 80 40.0
CAN.G890.51 Capsicum annuum HOM05D000192 ORTHO05D000123 1.3e-06 57.8 169 30.8
ECA246G0956 Erigeron canadensis HOM05D000192 ORTHO05D000123 1.3e-06 57.8 96 37.5
Gohir.D11G177800 Gossypium hirsutum HOM05D000192 ORTHO05D000123 1.3e-06 57.8 97 39.2
Duzib147G0854 Durio zibethinus HOM05D000192 ORTHO05D000123 2.2e-06 57.0 84 39.3
FvH4_1g10690 Fragaria vesca HOM05D000192 ORTHO05D000123 2.2e-06 57.0 94 40.4
FAN19G3203 Fragaria x ananassa HOM05D000192 ORTHO05D000123 2.2e-06 57.0 94 40.4
HanXRQChr16g0531571 Helianthus annuus HOM05D000192 ORTHO05D000123 2.2e-06 57.0 96 37.5
Lj4C229T2 Lonicera japonica HOM05D000192 ORTHO05D000123 2.2e-06 57.0 98 35.7
Thecc.01G008700 Theobroma cacao HOM05D000192 ORTHO05D000123 2.2e-06 57.0 112 33.9
FAN28G2398 Fragaria x ananassa HOM05D000192 ORTHO05D000123 2.9e-06 56.6 94 39.4
Gorai.007G189600 Gossypium raimondii HOM05D000192 ORTHO05D000123 2.9e-06 56.6 97 38.1
RcHm_v2.0_Chr2g0097871 Rosa chinensis HOM05D000192 ORTHO05D000123 2.9e-06 56.6 94 40.4
FAN26G1606 Fragaria x ananassa HOM05D000192 ORTHO05D000123 3.8e-06 56.2 94 39.4
CSS0017865 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 5.0e-06 55.8 75 42.7
ECA246G5196 Erigeron canadensis HOM05D000192 ORTHO05D000123 5.0e-06 55.8 86 40.7
Lj4A229G21 Lonicera japonica HOM05D000192 ORTHO05D000123 5.0e-06 55.8 96 37.5
Gorai.003G004200 Gossypium raimondii HOM05D000192 ORTHO05D000123 6.5e-06 55.5 107 40.2
MD15G1234900 Malus domestica HOM05D000192 ORTHO05D000123 6.5e-06 55.5 113 33.6
Nn8g40851 Nelumbo nucifera HOM05D000192 ORTHO05D000123 6.5e-06 55.5 83 33.7
Nn8g40854 Nelumbo nucifera HOM05D000192 ORTHO05D000123 6.5e-06 55.5 109 29.4
QL06p052508 Quercus lobata HOM05D000192 ORTHO05D000123 6.5e-06 55.5 98 37.8
RcHm_v2.0_Chr2g0097881 Rosa chinensis HOM05D000192 ORTHO05D000123 6.5e-06 55.5 85 41.2
CSS0034507 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 8.5e-06 55.1 108 35.2
Lsat_1_v5_gn_3_70961 Lactuca sativa HOM05D000192 ORTHO05D000123 8.5e-06 55.1 96 35.4
Nn8g40863 Nelumbo nucifera HOM05D000192 ORTHO05D000123 8.5e-06 55.1 76 34.2
Solyc02g083000.1 Solanum lycopersicum HOM05D000192 ORTHO05D000123 8.5e-06 55.1 95 38.9
Sopen02g027780 Solanum pennellii HOM05D000192 ORTHO05D000123 8.5e-06 55.1 95 38.9
GSVIVG01002748001 Vitis vinifera HOM05D000192 ORTHO05D000123 8.5e-06 55.1 69 40.6


User provided reference genes

Program Settings