Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 0.0e+00 1226.8 596 100.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.6e-144 517.3 450 61.8
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 9.7e-139 498.0 473 57.1
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.4e-132 477.6 452 57.5
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 7.0e-129 465.3 458 57.6
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 2.5e-126 456.8 454 54.6
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 8.0e-125 451.8 454 54.8
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.7e-119 434.1 454 53.1
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.5e-118 431.0 466 53.4
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 9.5e-118 428.3 477 52.0
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 2.8e-117 426.8 459 53.2
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.0e-116 424.9 418 55.5
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 4.0e-116 422.9 463 49.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 6.8e-116 422.2 455 51.2
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 1.7e-114 417.5 464 51.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.2e-114 417.2 457 51.9
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 4.9e-114 416.0 460 50.0
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.4e-113 414.5 465 49.5
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.9e-113 414.1 480 49.4
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 4.6e-112 409.5 464 47.2
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 6.0e-112 409.1 472 48.5
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 5.0e-111 406.0 470 46.6
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 6.6e-111 405.6 457 48.4
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 8.6e-111 405.2 481 47.8
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 2.1e-109 400.6 485 49.5
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 2.1e-109 400.6 460 46.7
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 1.8e-108 397.5 454 46.7
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 2.3e-108 397.1 466 48.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 4.0e-108 396.4 474 47.9
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 8.9e-108 395.2 459 47.1
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.2e-107 394.8 467 49.3
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.2e-107 394.8 485 48.5
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 4.4e-107 392.9 462 49.4
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 4.4e-107 392.9 484 48.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.5e-107 392.1 460 49.6
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 9.8e-107 391.7 457 48.6
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 4.9e-106 389.4 453 45.7
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.1e-105 388.3 455 49.0
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.1e-105 388.3 464 48.5
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.1e-105 388.3 467 45.2
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 2.4e-105 387.1 274 69.3
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.1e-105 386.3 452 49.3
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.7e-104 383.6 482 47.7
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.5e-104 383.3 466 48.5
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 4.6e-104 382.9 476 46.8
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.0e-103 381.7 411 52.1
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.9e-103 379.8 463 47.3
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 8.6e-103 378.6 503 44.9
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.1e-102 378.3 483 47.6
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.1e-102 378.3 463 47.5
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.9e-102 377.5 479 47.4
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.9e-102 377.5 479 47.4
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 3.3e-102 376.7 463 48.4
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 3.3e-102 376.7 474 47.5
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 4.3e-102 376.3 460 45.9
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 7.3e-102 375.6 453 47.0
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 7.3e-102 375.6 466 47.2
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 9.5e-102 375.2 445 47.2
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.6e-101 374.4 469 45.2
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 4.7e-101 372.9 268 67.2
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 6.2e-101 372.5 458 47.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 4.0e-100 369.8 475 47.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 9.9e-99 365.2 451 47.2
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.3e-98 364.8 476 44.5
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 1.4e-97 361.3 465 46.7
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.4e-97 360.5 455 47.0
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 3.5e-96 356.7 465 45.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 8.6e-95 352.1 471 46.1
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 2.4e-92 344.0 469 42.2
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 5.2e-92 342.8 463 45.4
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 8.4e-90 335.5 466 42.1
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 7.1e-89 332.4 539 40.1
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.6e-88 331.3 457 41.6
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 2.5e-86 323.9 495 42.0
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.8e-84 317.8 448 42.2
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 2.1e-80 304.3 454 43.8
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 7.9e-80 302.4 488 40.8
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.3e-79 301.6 484 39.0
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.3e-79 300.8 475 38.1
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 2.1e-77 294.3 483 38.3
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 4.0e-76 290.0 483 37.9
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 6.9e-76 289.3 460 39.3
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.2e-75 288.5 480 38.1
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 4.5e-75 286.6 481 37.8
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.7e-74 284.6 266 53.8
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.4e-73 280.8 483 37.3
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.6e-69 268.1 294 52.4
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 3.7e-69 266.9 217 63.1
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 6.2e-69 266.2 235 57.4
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 6.2e-69 266.2 361 43.2
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.4e-65 255.0 188 74.5
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 4.2e-65 253.4 466 36.1
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 5.1e-63 246.5 462 37.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 8.7e-63 245.7 470 35.5
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 9.6e-62 242.3 183 63.9
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.2e-59 235.3 153 78.4
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.9e-58 230.7 354 40.4
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.2e-53 214.5 173 60.1
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 9.0e-52 209.1 157 61.1
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.5e-51 208.4 153 62.7
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.9e-49 201.4 143 62.2
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 2.5e-49 201.1 352 38.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 3.9e-47 193.7 458 31.9
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 8.8e-47 192.6 210 46.2
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.3e-46 190.7 250 43.2
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 9.7e-46 189.1 210 47.1
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 2.8e-45 187.6 483 31.3
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 1.3e-42 178.7 127 63.0
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 3.8e-42 177.2 129 61.2
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 5.0e-42 176.8 462 31.8
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 3.2e-41 174.1 332 36.1
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.8e-39 168.3 149 62.4
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 3.9e-39 167.2 148 50.7
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.5e-38 165.2 149 59.7
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 3.3e-38 164.1 149 59.1
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 3.3e-38 164.1 149 59.1
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 8.2e-37 159.5 144 59.7
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 7.0e-36 156.4 149 58.4
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 2.0e-35 154.8 131 62.6
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.7e-32 144.4 171 45.6
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.3e-31 141.4 141 44.0
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 3.0e-31 141.0 145 53.1
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 4.0e-31 140.6 152 48.7
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 8.2e-29 132.9 308 33.8
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 7.7e-27 126.3 155 37.4
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.8e-26 124.0 369 31.4
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 3.4e-22 110.9 104 52.9
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 4.4e-22 110.5 136 51.5
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.3e-21 109.0 267 31.5
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 3.7e-21 107.5 140 43.6
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 3.7e-21 107.5 124 52.4
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 5.4e-12 77.0 72 56.9
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 5.4e-12 77.0 74 56.8
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.3e-10 72.4 170 31.2
Sabra15G0117400 Salix brachista HOM05D005804 ORTHO05D006849 5.6e-09 67.0 104 40.4


User provided reference genes

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