Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 7.3e-50 200.3 104 100.0
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 5.1e-43 177.6 104 87.5
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 3.1e-40 168.3 103 81.6
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 2.2e-38 162.2 101 83.2
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 3.8e-38 161.4 104 80.8
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 2.4e-37 158.7 101 80.2
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 7.1e-37 157.1 104 81.7
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 2.1e-36 155.6 100 79.0
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 2.7e-36 155.2 104 74.0
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.0e-35 153.3 103 75.7
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 3.9e-35 151.4 101 75.2
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 3.9e-35 151.4 101 75.2
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 3.9e-35 151.4 101 79.2
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 5.1e-35 151.0 101 75.2
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 6.7e-35 150.6 100 79.0
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.1e-34 149.8 104 75.0
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 9.6e-34 146.7 101 73.3
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.6e-33 146.0 101 73.3
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 2.1e-33 145.6 105 74.3
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 2.8e-33 145.2 100 75.0
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 2.8e-33 145.2 105 72.4
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 3.7e-33 144.8 96 77.1
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 4.8e-33 144.4 100 73.0
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.8e-33 144.4 102 77.5
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 6.2e-33 144.1 104 69.2
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 6.2e-33 144.1 104 73.1
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.1e-32 143.3 100 74.0
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.8e-32 142.5 102 76.5
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.4e-32 142.1 102 76.5
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 3.1e-32 141.7 102 69.6
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.1e-32 141.7 102 75.5
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 3.1e-32 141.7 104 70.2
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 5.3e-32 141.0 101 74.3
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 2.6e-31 138.7 100 73.0
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 2.6e-31 138.7 101 69.3
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 3.4e-31 138.3 101 70.3
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 5.8e-31 137.5 101 68.3
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 5.8e-31 137.5 102 67.6
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 7.6e-31 137.1 107 69.2
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 3.8e-30 134.8 102 68.6
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 4.9e-30 134.4 103 70.9
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 4.9e-30 134.4 105 66.7
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 6.5e-30 134.0 105 67.6
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.1e-29 133.3 104 68.3
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.4e-29 132.9 105 65.7
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 2.5e-29 132.1 104 66.3
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 3.2e-29 131.7 103 66.0
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 65.4
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.2e-29 131.7 105 65.7
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 67.3
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 68.3
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 5.5e-29 131.0 101 67.3
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.2e-28 129.8 104 66.3
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.2e-28 129.8 101 67.3
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 2.1e-28 129.0 107 67.3
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 3.5e-28 128.3 105 66.7
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 3.5e-28 128.3 105 66.7
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 3.5e-28 128.3 100 68.0
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 4.6e-28 127.9 105 66.7
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 4.6e-28 127.9 105 66.7
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 6.0e-28 127.5 101 65.3
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 7.9e-28 127.1 104 65.4
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 1.0e-27 126.7 104 64.4
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 1.3e-27 126.3 105 65.7
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.3e-27 126.3 104 64.4
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.8e-27 125.9 96 70.8
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.8e-27 125.9 119 63.9
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 3.9e-27 124.8 105 64.8
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 3.9e-27 124.8 105 64.8
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 3.9e-27 124.8 105 64.8
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 3.9e-27 124.8 105 64.8
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 5.1e-27 124.4 104 63.5
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 6.7e-27 124.0 95 68.4
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 2.5e-26 122.1 104 64.4
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 5.7e-26 120.9 104 62.5
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 9.6e-26 120.2 104 62.5
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 2.8e-25 118.6 102 64.7
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 8.2e-25 117.1 106 60.4
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.1e-24 116.7 103 60.2
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 2.4e-24 115.5 104 61.5
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 2.4e-24 115.5 102 62.7
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 5.8e-23 110.9 96 62.5
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 5.8e-23 110.9 100 61.0
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.0e-22 110.2 67 89.6
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 3.8e-22 108.2 103 58.3
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 6.5e-22 107.5 110 55.5
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 8.4e-22 107.1 67 77.6
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 4.2e-21 104.8 89 61.8
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.2e-20 103.2 81 69.1
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.1e-20 102.4 107 55.1
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.8e-19 99.4 65 80.0
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 9.7e-18 93.6 81 63.0
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 2.2e-17 92.4 61 77.0
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 2.8e-17 92.0 63 77.8
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 2.8e-17 92.0 81 61.7
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 4.8e-17 91.3 62 77.4
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.8e-16 89.4 65 73.8
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 5.9e-15 84.3 104 49.0
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 7.7e-15 84.0 65 69.2
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 2.2e-14 82.4 89 51.7
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.1e-13 80.1 50 82.0
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.4e-13 79.7 54 79.6
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 5.5e-13 77.8 50 82.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 9.4e-13 77.0 52 78.8
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-12 75.9 53 79.2
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 2.3e-11 72.4 53 73.6
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 8.2e-09 63.9 104 38.5
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.8e-08 62.8 103 40.8
SMO203G0278 Selaginella moellendorffii HOM05D000001 ORTHO05D375656 6.5e-06 54.3 68 51.5


User provided reference genes

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