Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.9e-93 345.9 184 100.0
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.4e-51 206.8 179 65.4
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 9.0e-51 204.1 187 64.2
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 7.9e-47 191.0 175 60.6
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 2.3e-46 189.5 184 53.8
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 8.7e-46 187.6 171 59.6
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.5e-45 186.8 152 61.2
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 2.5e-45 186.0 182 58.2
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 5.6e-45 184.9 136 66.9
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 9.6e-45 184.1 136 66.2
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 2.8e-44 182.6 179 58.1
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 6.2e-44 181.4 134 67.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 8.1e-44 181.0 139 64.7
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 1.4e-43 180.3 143 62.2
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 4.0e-43 178.7 152 60.5
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 9.0e-43 177.6 177 54.8
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.2e-42 177.2 145 61.4
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 1.2e-42 177.2 168 56.5
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.6e-42 176.0 134 64.9
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 2.6e-42 176.0 166 55.4
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.6e-42 176.0 156 59.0
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 2.6e-42 176.0 162 56.2
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 2.6e-42 176.0 141 63.8
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.4e-42 175.6 134 64.9
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.4e-42 175.6 144 61.8
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 3.4e-42 175.6 172 54.1
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 4.5e-42 175.3 163 55.8
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 4.5e-42 175.3 172 54.1
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 4.5e-42 175.3 172 54.1
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 7.6e-42 174.5 142 63.4
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 7.6e-42 174.5 142 63.4
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 1.3e-41 173.7 142 62.7
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.3e-41 173.7 163 55.2
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 1.3e-41 173.7 144 62.5
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 2.2e-41 172.9 149 61.7
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 2.2e-41 172.9 139 61.9
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 2.9e-41 172.6 172 54.1
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 3.8e-41 172.2 136 64.7
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 3.8e-41 172.2 185 53.0
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 3.8e-41 172.2 149 59.7
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 8.4e-41 171.0 142 62.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 8.4e-41 171.0 140 62.1
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.1e-40 170.6 154 61.0
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.4e-40 170.2 142 62.0
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 1.9e-40 169.9 139 63.3
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 2.5e-40 169.5 146 59.6
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 7.1e-40 167.9 142 59.2
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 7.1e-40 167.9 142 60.6
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.6e-39 166.8 153 59.5
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 1.6e-39 166.8 141 61.0
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 2.1e-39 166.4 152 55.3
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 4.6e-39 165.2 144 58.3
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.6e-39 165.2 148 57.4
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 4.6e-39 165.2 143 57.3
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 6.0e-39 164.9 140 61.4
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.3e-38 162.9 137 55.5
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 5.1e-38 161.8 144 60.4
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 5.1e-38 161.8 153 56.2
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 5.1e-38 161.8 143 57.3
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 8.7e-38 161.0 149 57.0
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 1.1e-37 160.6 136 57.4
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.9e-37 159.8 134 58.2
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 4.3e-37 158.7 150 54.7
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 4.3e-37 158.7 150 54.7
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 5.7e-37 158.3 162 51.2
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 5.7e-37 158.3 142 58.5
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 2.1e-36 156.4 171 52.6
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.8e-36 156.0 150 54.7
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 4.8e-36 155.2 162 51.2
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.8e-35 153.3 133 55.6
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 5.3e-35 151.8 151 53.0
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.0e-34 149.8 165 52.7
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 2.6e-34 149.4 142 56.3
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 4.5e-34 148.7 133 54.9
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 4.5e-34 148.7 144 56.9
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 1.7e-33 146.7 144 51.4
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.9e-33 146.0 114 67.5
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.1e-32 144.1 124 58.9
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.2e-32 142.5 120 58.3
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.2e-31 140.6 138 53.6
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 2.1e-31 139.8 162 48.1
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 7.4e-29 131.3 119 55.5
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 1.3e-28 130.6 108 56.5
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 2.2e-28 129.8 127 57.5
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 2.2e-28 129.8 112 56.2
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 3.7e-28 129.0 119 54.6
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.5e-26 123.6 137 49.6
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 2.2e-25 119.8 108 58.3
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 1.6e-23 113.6 142 40.8
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.7e-23 112.8 120 50.0
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 2.3e-22 109.8 105 52.4
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 6.7e-22 108.2 81 66.7
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.3e-17 94.0 75 64.0
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.9e-16 90.1 74 60.8
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 6.1e-15 85.1 99 49.5
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 5.7e-13 78.6 121 38.8
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 1.3e-12 77.4 137 35.8
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.4e-11 73.9 61 62.3
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 3.1e-11 72.8 64 56.2
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 3.1e-11 72.8 110 37.3
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 1.7e-09 67.0 127 37.0


User provided reference genes

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