Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 1.2e-272 942.6 474 100.0
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.9e-92 344.0 314 66.9
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 6.7e-90 335.5 318 64.8
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 2.0e-86 323.9 329 61.7
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.6e-67 261.2 295 56.9
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 8.8e-66 255.4 309 53.7
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 4.3e-65 253.1 318 52.8
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 2.6e-62 243.8 320 50.3
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 4.5e-62 243.0 332 48.5
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.5e-60 236.1 308 50.6
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 1.6e-59 234.6 300 53.7
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 2.1e-59 234.2 296 53.4
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 6.1e-59 232.6 317 49.5
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 1.8e-58 231.1 299 51.8
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 5.1e-58 229.6 308 50.0
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 9.7e-57 225.3 308 50.0
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 9.7e-57 225.3 317 49.2
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.3e-56 224.9 298 50.7
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.2e-56 224.2 306 49.3
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 3.7e-56 223.4 293 49.8
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.1e-55 221.9 339 44.5
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 5.3e-55 219.5 329 45.6
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 5.3e-55 219.5 315 48.9
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.0e-54 217.6 305 50.2
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 2.0e-54 217.6 299 48.2
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 2.6e-54 217.2 293 50.9
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 2.6e-54 217.2 309 47.9
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 4.5e-54 216.5 313 48.2
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 7.7e-54 215.7 318 48.1
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 3.8e-53 213.4 292 49.0
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.8e-53 213.4 326 45.7
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 3.8e-53 213.4 320 45.9
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.5e-53 212.6 313 48.2
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 1.1e-52 211.8 308 46.4
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 1.9e-52 211.1 259 52.5
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 3.2e-52 210.3 305 48.5
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 4.2e-52 209.9 313 47.0
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 5.5e-52 209.5 294 48.6
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.1e-51 207.6 314 47.5
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 8.0e-51 205.7 333 45.9
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.8e-50 204.5 330 44.8
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 2.3e-50 204.1 298 47.3
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 8.8e-50 202.2 321 46.7
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 2.6e-49 200.7 333 45.9
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 7.4e-49 199.1 311 46.6
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.3e-48 198.4 300 47.7
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.2e-48 197.6 286 47.6
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 2.4e-47 194.1 288 47.6
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 3.1e-47 193.7 323 44.9
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 3.5e-46 190.3 313 46.0
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 7.7e-46 189.1 305 46.2
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 2.2e-45 187.6 321 44.2
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 2.9e-45 187.2 305 47.5
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 2.9e-45 187.2 373 39.7
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.8e-45 186.8 313 44.4
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 5.0e-45 186.4 293 46.8
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.1e-44 185.3 292 48.6
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 3.2e-44 183.7 311 45.7
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 4.2e-44 183.3 308 43.2
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 9.4e-44 182.2 298 43.0
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.2e-43 181.8 331 43.8
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 2.7e-43 180.6 289 44.6
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 4.7e-43 179.9 317 42.0
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 4.0e-42 176.8 300 45.7
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 6.7e-42 176.0 316 43.0
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 8.8e-42 175.6 299 43.5
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 7.5e-41 172.6 301 44.5
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 9.7e-41 172.2 301 44.2
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.6e-38 164.9 394 36.3
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 2.0e-38 164.5 297 41.4
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.5e-36 158.3 297 41.8
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 2.3e-34 151.0 298 41.6
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 6.8e-34 149.4 310 41.6
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 4.4e-33 146.7 294 41.8
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 1.3e-32 145.2 314 39.2
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 1.3e-32 145.2 310 41.3
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 8.3e-32 142.5 337 37.7
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 8.3e-32 142.5 293 38.9
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 5.4e-31 139.8 310 39.0
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 2.7e-30 137.5 310 37.7
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 2.7e-30 137.5 311 38.9
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 2.7e-30 137.5 311 38.9
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 3.8e-29 133.7 310 36.8
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 1.1e-28 132.1 332 36.4
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 7.2e-28 129.4 255 40.8
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 9.5e-28 129.0 316 37.3
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 3.6e-27 127.1 312 35.3
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 6.1e-27 126.3 356 33.7
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 2.3e-26 124.4 336 36.9
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 5.2e-26 123.2 311 36.7
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 5.2e-26 123.2 311 36.7
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.7e-24 117.1 286 36.7
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 4.9e-24 116.7 322 35.4
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 6.3e-24 116.3 308 34.7
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 3.5e-22 110.5 160 47.5
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 2.5e-20 104.4 292 34.9
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.2e-19 102.1 306 33.7
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 1.2e-19 102.1 292 35.3
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 4.7e-19 100.1 299 35.1
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 6.1e-19 99.8 118 49.2
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-16 91.7 72 63.9
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.2e-16 91.3 73 63.0
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.9e-16 90.1 61 72.1
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.4e-16 89.7 71 62.0
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.9e-15 88.2 72 59.7
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.4e-15 87.8 72 61.1
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.4e-15 87.8 72 61.1
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.1e-15 87.0 72 61.1
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 4.6e-14 83.6 169 40.2
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 4.6e-14 83.6 308 32.1
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 1.7e-13 81.6 317 31.2
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.6e-13 79.7 51 72.5
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 3.3e-12 77.4 294 31.0
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 3.3e-12 77.4 47 74.5
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 3.1e-10 70.9 282 32.3
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 6.8e-10 69.7 205 34.1
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 1.5e-09 68.6 94 39.4
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.7e-08 65.1 94 42.6
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 6.4e-08 63.2 67 47.8
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.4e-07 62.0 63 54.0
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 3.2e-07 60.8 224 28.1


User provided reference genes

Program Settings