Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 9.4e-99 365.5 181 100.0
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.9e-75 288.1 181 75.7
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.9e-75 288.1 181 75.7
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 4.0e-49 200.7 178 58.4
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 4.0e-49 200.7 178 58.4
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 7.6e-48 196.4 181 60.2
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 1.4e-46 192.2 182 53.8
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 3.0e-44 184.5 157 58.6
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 3.9e-44 184.1 181 48.6
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 5.1e-44 183.7 174 49.4
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 5.6e-43 180.3 181 49.2
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 1.3e-39 169.1 180 48.9
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 2.9e-39 167.9 170 50.6
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 2.4e-38 164.9 164 51.2
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 5.4e-38 163.7 182 47.3
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 6.0e-37 160.2 182 46.7
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 1.3e-36 159.1 170 49.4
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 1.7e-36 158.7 169 50.3
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 6.6e-36 156.8 166 48.2
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 1.1e-35 156.0 177 45.2
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 1.5e-35 155.6 183 44.3
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 3.3e-35 154.5 172 45.9
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 2.8e-34 151.4 165 47.9
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 1.8e-33 148.7 165 46.7
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 4.0e-33 147.5 162 47.5
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.5e-32 145.6 164 44.5
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 2.6e-32 144.8 182 41.2
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 2.6e-32 144.8 161 44.1
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 1.3e-31 142.5 153 49.0
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 1.7e-31 142.1 181 41.4
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 2.9e-31 141.4 180 42.8
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 4.2e-30 137.5 158 46.2
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 9.3e-30 136.3 157 42.7
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 1.8e-25 122.1 182 39.0
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 4.9e-23 114.0 157 43.3
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 8.4e-23 113.2 162 41.4
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 1.0e-20 106.3 182 36.8
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 1.3e-20 105.9 182 33.5
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 5.1e-20 104.0 168 36.3
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 6.7e-20 103.6 181 37.6
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 7.4e-19 100.1 184 31.5
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 2.8e-18 98.2 182 34.6
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 1.1e-17 96.3 182 32.4
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 7.1e-14 83.6 153 30.7
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 9.3e-14 83.2 153 30.7
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 1.2e-13 82.8 153 30.7
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 7.4e-11 73.6 150 32.7
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 9.6e-11 73.2 104 38.5
Actinidia14742 Actinidia chinensis HOM05D008483 ORTHO05D018225 1.0e-07 63.2 46 71.7


User provided reference genes

Program Settings