Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0152400 Rhododendron simsii HOM05D033398 ORTHO05D000593 5.3e-246 854.0 454 100.0
CSS0024579 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 2.6e-43 180.6 376 38.8
Rhsim12G0158800 Rhododendron simsii HOM05D033398 ORTHO05D000593 1.3e-37 161.8 296 41.6
Rhsim12G0159000 Rhododendron simsii HOM05D033398 ORTHO05D338520 7.7e-35 152.5 296 40.5
Dinv32307 Davidia involucrata HOM05D000336 ORTHO05D000593 1.8e-31 141.4 309 36.6
Dinv01258 Davidia involucrata HOM05D000336 ORTHO05D000593 6.7e-31 139.4 316 36.7
CSS0035401 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 3.3e-30 137.1 319 36.1
Actinidia39543 Actinidia chinensis HOM05D000336 ORTHO05D000593 1.4e-23 115.2 308 34.7
Hma1.2p1_0012F.1_g007690 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 6.5e-18 96.3 341 31.7
Hma1.2p1_0015F.1_g010470 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 1.2e-16 92.0 552 25.5
Rhsim02G0151700 Rhododendron simsii HOM05D000336 ORTHO05D000593 1.6e-16 91.7 289 31.1
Hma1.2p1_0015F.1_g010490 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.6e-16 90.5 320 30.3
Hma1.2p1_0015F.1_g010540 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.9e-15 87.0 320 30.0
TAR629G3391 Trochodendron aralioides HOM05D000336 ORTHO05D000593 7.4e-14 82.8 323 28.5
Nitab4.5_0003714g0120 Nicotiana tabacum HOM05D000018 ORTHO05D000593 2.9e-10 70.9 138 32.6
Nitab4.5_0004447g0050 Nicotiana tabacum HOM05D000018 ORTHO05D000593 5.0e-10 70.1 138 32.6
GSVIVG01021322001 Vitis vinifera HOM05D000336 ORTHO05D000593 8.5e-10 69.3 295 27.5
Gohir.A10G032300 Gossypium hirsutum HOM05D000336 ORTHO05D000593 3.2e-09 67.4 136 47.8
Eucgr.D00352 Eucalyptus grandis HOM05D000336 ORTHO05D000593 7.2e-09 66.2 142 42.3
Gorai.011G034900 Gossypium raimondii HOM05D000336 ORTHO05D000593 1.2e-08 65.5 136 48.5
CAN.G257.98 Capsicum annuum HOM05D000336 ORTHO05D000593 2.1e-08 64.7 149 30.2
Sabra11G0064100 Salix brachista HOM05D000336 ORTHO05D000593 2.1e-08 64.7 123 42.3
Peaxi162Scf01375g00012 Petunia axillaris HOM05D000336 ORTHO05D000593 2.7e-08 64.3 138 30.4
Solyc02g071510.3 Solanum lycopersicum HOM05D000336 ORTHO05D000593 2.7e-08 64.3 277 27.8
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 6.1e-08 63.2 139 44.6
Potri.001G355300 Populus trichocarpa HOM05D000336 ORTHO05D000593 1.0e-07 62.4 139 43.9
Potri.011G077100 Populus trichocarpa HOM05D000336 ORTHO05D000593 1.0e-07 62.4 132 43.9
QL05p052872 Quercus lobata HOM05D000336 ORTHO05D000593 2.3e-07 61.2 133 36.1
Manes.15G116300 Manihot esculenta HOM05D000336 ORTHO05D000593 3.0e-07 60.8 126 34.9
PGSC0003DMG400007228 Solanum tuberosum HOM05D000336 ORTHO05D000593 3.0e-07 60.8 138 29.7
PGR031G1206 Punica granatum HOM05D000336 ORTHO05D000593 4.0e-07 60.5 132 33.3
TWI73G1232 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 5.2e-07 60.1 123 36.6
TAR627G0947 Trochodendron aralioides HOM05D000336 ORTHO05D000593 5.2e-07 60.1 132 34.8
Lj1A1180G72 Lonicera japonica HOM05D000336 ORTHO05D000593 1.2e-06 58.9 89 38.2
Sopen02g020540 Solanum pennellii HOM05D000336 ORTHO05D000593 1.2e-06 58.9 277 27.1
Actinidia02405 Actinidia chinensis HOM05D000336 ORTHO05D000593 1.5e-06 58.5 108 38.9
Gohir.A05G151900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 2.6e-06 57.8 119 49.6
MBI05_g12582_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D000593 2.6e-06 57.8 112 34.8
Lalb_Chr12g0204811 Lupinus albus HOM05D000336 ORTHO05D000593 4.4e-06 57.0 124 33.1
CDE12G0308 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 9.7e-06 55.8 119 45.4
DCAR_003954 Daucus carota HOM05D000336 ORTHO05D000593 9.7e-06 55.8 195 26.7


User provided reference genes

Program Settings