Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.0e-40 168.7 87 100.0
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 2.4e-22 108.6 86 75.6
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 6.6e-20 100.5 86 65.1
Rhsim12G0143700 Rhododendron simsii HOM05D001813 ORTHO05D009599 2.8e-18 95.1 71 71.8
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 3.6e-18 94.7 86 67.4
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 3.1e-17 91.7 84 65.5
Dinv09801 Davidia involucrata HOM05D007913 ORTHO05D009599 1.3e-15 86.3 77 61.0
Hma1.2p1_1001F.1_g246480 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.7e-15 85.9 79 62.0
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 5.4e-14 80.9 61 70.5
Dinv28091 Davidia involucrata HOM05D007913 ORTHO05D009599 1.9e-11 72.4 47 74.5
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 3.1e-09 65.1 86 48.8
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 9.0e-09 63.5 90 44.4
Manes.05G137750 Manihot esculenta HOM05D021252 ORTHO05D012395 9.0e-09 63.5 97 42.3
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 1.2e-08 63.2 94 42.6
Migut.I00343 Erythranthe guttata HOM05D019774 ORTHO05D018531 3.4e-08 61.6 86 46.5
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.2e-07 58.9 88 45.5
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.2e-07 58.9 83 48.2
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 3.8e-07 58.2 82 47.6
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 8.4e-07 57.0 85 47.1
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 1.1e-06 56.6 86 44.2
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.4e-06 56.2 102 42.2
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 1.4e-06 56.2 78 43.6
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 1.9e-06 55.8 87 40.2
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 1.9e-06 55.8 87 40.2
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 1.9e-06 55.8 84 40.5
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 1.9e-06 55.8 86 44.2
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 2.4e-06 55.5 84 47.6
Eucgr.G02329 Eucalyptus grandis HOM05D007913 ORTHO05D009599 4.2e-06 54.7 82 41.5
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 4.2e-06 54.7 53 56.6
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.2e-06 54.7 86 46.5
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.4e-06 54.3 87 43.7
MSTRG.4515 Avicennia marina HOM05D019774 ORTHO05D018531 9.3e-06 53.5 79 45.6
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 9.3e-06 53.5 80 43.8
ECA238G3709 Erigeron canadensis HOM05D019774 ORTHO05D018531 9.3e-06 53.5 79 43.0


User provided reference genes

Program Settings