Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.1e-192 676.4 339 100.0
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.8e-151 538.1 346 80.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.8e-150 536.2 346 80.6
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.0e-148 530.4 342 81.6
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.2e-144 516.9 328 81.1
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.4e-137 493.4 331 78.5
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 6.8e-137 491.1 337 75.1
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 9.8e-136 487.3 334 75.7
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.3e-135 486.9 329 76.6
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.1e-134 483.8 326 76.1
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 4.1e-134 481.9 334 74.3
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 9.2e-134 480.7 326 76.1
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 2.0e-133 479.6 337 72.7
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 7.8e-133 477.6 341 73.0
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.9e-132 475.7 333 73.9
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.5e-131 473.4 325 74.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.9e-131 473.0 328 72.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 3.3e-131 472.2 329 72.6
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 4.3e-131 471.9 336 72.3
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 7.3e-131 471.1 335 72.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.1e-130 469.5 342 73.1
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 4.7e-130 468.4 342 72.2
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.4e-129 466.8 330 72.4
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 3.0e-129 465.7 342 72.2
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 3.0e-129 465.7 325 74.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 8.9e-129 464.2 329 71.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.9e-129 464.2 326 73.9
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.9e-129 464.2 326 73.9
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 8.9e-129 464.2 327 74.9
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.4e-128 462.2 326 73.6
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 3.4e-128 462.2 436 60.3
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 7.5e-128 461.1 326 73.6
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.7e-127 459.9 337 69.4
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 2.9e-127 459.1 326 72.7
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 3.7e-127 458.8 326 72.7
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 4.9e-127 458.4 343 69.4
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 6.4e-127 458.0 342 70.5
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 1.1e-126 457.2 326 72.4
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.4e-126 456.8 329 70.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.9e-126 456.4 330 71.8
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 2.4e-126 456.1 345 70.1
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 2.4e-126 456.1 336 70.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 4.1e-126 455.3 343 70.3
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 4.1e-126 455.3 340 70.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 7.0e-126 454.5 331 69.8
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 9.2e-126 454.1 328 70.4
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.0e-125 453.0 344 70.1
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.0e-125 453.0 335 69.9
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 4.6e-125 451.8 326 72.7
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.6e-125 451.8 329 69.6
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 4.6e-125 451.8 339 69.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.3e-124 450.3 335 70.4
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 2.3e-124 449.5 336 71.1
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 3.0e-124 449.1 346 68.2
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 5.0e-124 448.4 329 69.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 6.6e-124 448.0 309 73.8
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 1.1e-123 447.2 337 69.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.9e-123 446.4 330 69.1
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.3e-123 445.7 326 71.2
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 4.3e-123 445.3 329 70.8
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 5.6e-123 444.9 345 69.3
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 7.3e-123 444.5 331 68.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 9.5e-123 444.1 331 68.3
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 9.5e-123 444.1 330 68.8
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.2e-122 443.7 329 70.2
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 8.0e-122 441.0 331 68.3
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.8e-121 439.9 335 68.4
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.2e-120 437.2 325 70.2
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.2e-120 437.2 327 69.1
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 1.2e-120 437.2 340 67.9
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 5.8e-120 434.9 336 68.5
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 5.8e-120 434.9 325 68.3
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 2.9e-119 432.6 311 71.1
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.7e-119 432.2 342 66.7
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.5e-117 425.6 279 76.0
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.6e-116 421.4 311 71.4
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.1e-115 420.6 279 74.2
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 4.3e-115 418.7 325 67.4
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 6.8e-113 411.4 327 68.5
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.2e-112 410.6 328 66.2
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 7.5e-112 407.9 325 65.8
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 5.4e-110 401.7 341 64.2
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.3e-108 397.1 328 65.2
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.5e-107 392.9 266 75.2
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 3.2e-102 375.9 395 55.9
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.7e-100 370.2 328 62.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 5.1e-100 368.6 346 59.8
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 8.1e-98 361.3 327 61.2
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 4.4e-96 355.5 326 59.2
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.4e-96 355.5 359 55.4
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 5.1e-92 342.0 355 56.9
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.0e-88 330.1 327 54.4
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 6.0e-85 318.5 325 54.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 7.4e-83 311.6 207 73.9
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.9e-79 299.7 322 51.6
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 3.5e-77 292.7 246 65.9
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.9e-71 273.1 294 50.7
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 2.2e-66 256.9 273 53.8
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 8.2e-58 228.4 357 40.9
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 3.3e-51 206.5 306 40.5
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 7.2e-46 188.7 167 61.1
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.2e-42 177.2 192 56.2
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 3.1e-41 173.3 192 51.6
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 7.0e-41 172.2 119 63.9
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.5e-40 169.9 96 86.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.9e-39 166.8 106 73.6
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 2.2e-18 97.4 153 40.5
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 5.2e-12 76.3 51 66.7
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 2.0e-11 74.3 51 66.7


User provided reference genes

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