Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.0e-131 473.4 243 100.0
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 3.8e-81 305.4 246 71.5
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.9e-56 223.4 253 54.9
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 2.5e-56 223.0 250 53.2
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.7e-53 211.8 251 54.6
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.5e-50 202.6 249 51.8
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 6.5e-49 198.4 253 50.6
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 8.8e-46 188.0 274 45.3
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.1e-45 187.6 256 47.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.1e-45 187.6 257 47.5
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 4.4e-45 185.7 249 46.2
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 8.2e-44 181.4 247 48.6
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-43 180.6 250 48.4
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 2.4e-43 179.9 256 48.0
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 3.1e-43 179.5 253 46.6
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.6e-42 176.4 253 46.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 2.6e-42 176.4 251 48.2
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.6e-42 176.4 256 45.7
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.5e-42 175.6 248 47.2
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 7.7e-42 174.9 247 47.0
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.3e-41 174.1 256 44.5
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.9e-41 172.9 256 44.9
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 5.0e-41 172.2 256 44.9
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 8.5e-41 171.4 269 43.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.1e-40 171.0 248 46.4
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.5e-40 170.6 253 47.8
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.5e-40 170.6 248 45.6
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.9e-40 170.2 252 46.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 4.2e-40 169.1 251 46.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 4.2e-40 169.1 248 44.4
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 5.5e-40 168.7 248 44.8
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 5.5e-40 168.7 251 43.4
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 9.4e-40 167.9 267 44.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.6e-39 167.2 261 45.6
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.1e-39 166.8 252 44.8
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 2.7e-39 166.4 249 43.4
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 3.6e-39 166.0 262 43.1
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 4.7e-39 165.6 248 44.4
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 8.0e-39 164.9 262 42.7
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.4e-38 164.1 281 41.6
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.8e-38 163.7 247 44.1
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 3.0e-38 162.9 259 44.4
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.0e-38 162.9 249 46.6
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 6.8e-38 161.8 248 44.0
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 8.8e-38 161.4 261 44.8
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 8.8e-38 161.4 261 44.8
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 2.0e-37 160.2 244 44.7
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 5.7e-37 158.7 251 42.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 9.7e-37 157.9 251 42.2
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.7e-36 157.1 257 43.6
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.8e-36 156.4 251 44.2
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 4.8e-36 155.6 226 44.7
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 6.3e-36 155.2 250 43.6
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 6.3e-36 155.2 269 41.3
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.1e-35 152.9 277 40.8
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.2e-34 151.0 198 44.9
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 2.7e-34 149.8 261 41.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 4.5e-34 149.1 270 40.7
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 5.9e-34 148.7 269 39.4
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.0e-33 147.9 254 40.6
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.0e-33 147.9 252 40.9
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.3e-33 147.5 247 41.3
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.5e-33 144.8 256 39.8
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 8.5e-33 144.8 200 44.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 8.5e-33 144.8 255 42.0
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.2e-32 142.5 260 36.9
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 7.2e-32 141.7 117 68.4
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.2e-31 141.0 246 41.9
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 4.7e-31 139.0 258 39.1
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 4.7e-31 139.0 257 38.9
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.0e-30 137.9 260 37.7
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.4e-30 137.5 248 40.3
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 1.8e-30 137.1 257 40.5
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.3e-30 136.7 281 37.7
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 4.0e-30 136.0 258 38.8
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 4.0e-30 136.0 258 38.8
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 4.0e-30 136.0 261 36.4
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 4.0e-30 136.0 260 38.1
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 5.2e-30 135.6 207 41.5
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.2e-29 134.4 262 37.4
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 2.6e-29 133.3 253 39.1
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.4e-29 132.9 261 37.5
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.1e-27 127.9 261 35.6
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.4e-27 127.5 251 37.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.4e-27 127.5 240 38.3
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 2.7e-26 123.2 264 36.0
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 3.5e-26 122.9 252 38.1
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 4.5e-26 122.5 251 37.8
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.3e-25 120.9 266 36.8
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 8.6e-25 118.2 261 35.6
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 8.6e-25 118.2 195 45.1
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 4.2e-24 115.9 199 39.2
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 4.2e-24 115.9 248 35.5
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 9.5e-24 114.8 215 41.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 7.0e-19 98.6 129 48.8
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.5e-18 96.3 112 50.9
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.5e-18 96.3 247 32.4
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 4.3e-16 89.4 250 31.2
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.6e-15 86.3 248 30.6
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 3.6e-15 86.3 87 55.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 4.4e-13 79.3 91 47.3
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 5.0e-09 65.9 168 31.5
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.4e-06 57.8 148 31.8


User provided reference genes

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