Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 3.6e-115 418.3 217 100.0
RhsimUnG0239500 Rhododendron simsii HOM05D028291 ORTHO05D020238 1.9e-71 273.1 186 81.2
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.6e-57 224.6 178 73.6
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.4e-56 221.5 178 73.6
Rhsim10G0086400 Rhododendron simsii HOM05D028291 ORTHO05D020238 7.1e-47 191.4 214 54.7
Rhsim13G0193300 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.9e-20 103.6 82 69.5
Rhsim13G0193800 Rhododendron simsii HOM05D000489 ORTHO05D000372 1.9e-20 103.6 85 67.1
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.8e-19 99.0 326 30.1
Rhsim05G0145800 Rhododendron simsii HOM05D028291 ORTHO05D020238 2.4e-18 96.7 86 64.0
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-17 94.4 364 27.5
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.0e-16 89.0 364 26.9
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.0e-16 89.0 364 26.9
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.9e-14 81.6 292 27.4
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 1.0e-13 81.3 131 40.5
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.4e-13 80.9 139 38.1
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.1e-13 79.0 215 32.6
vmacro16089 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.8e-11 73.2 214 32.7
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 4.8e-11 72.4 142 34.5
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 8.2e-11 71.6 191 31.4
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 8.2e-11 71.6 358 25.7
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.4e-10 70.9 238 27.3
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 3.1e-10 69.7 135 37.8
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 5.3e-10 68.9 324 23.5
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.9e-10 68.6 145 36.6
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-09 67.0 145 35.9
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-09 67.0 145 35.9
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-09 67.0 145 35.9
vmacro05647 Vaccinium macrocarpon HOM05D000041 ORTHO05D000452 2.0e-09 67.0 57 64.9
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.6e-09 66.6 145 35.9
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.6e-09 66.6 145 35.9
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.5e-09 65.9 145 35.9
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.5e-09 65.9 331 25.7
Rhsim06G0075000 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.9e-09 65.5 82 43.9
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 7.7e-09 65.1 149 34.2
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-08 64.7 145 35.2
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-08 64.7 145 35.2
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.8e-08 62.8 137 37.2
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.0e-08 62.4 81 40.7
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.5e-08 61.6 82 41.5
Rhsim09G0035100 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.1e-07 61.2 82 41.5
Rhsim01G0115400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.9e-07 60.5 82 43.9
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 2.5e-07 60.1 156 32.7
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.2e-07 59.3 141 32.6
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.2e-07 59.3 141 32.6
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.2e-07 58.5 145 33.1
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.8 56 50.0
QL09p033218 Quercus lobata HOM05D001576 ORTHO05D000401 1.2e-06 57.8 82 40.2
TWI75G1615 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.1e-06 55.5 147 29.9


User provided reference genes

Program Settings