Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0114300 Rhododendron simsii HOM05D001525 ORTHO05D001397 6.1e-55 217.2 109 100.0
CSS0029414 Camellia sinensis var. sinensis HOM05D001525 ORTHO05D001397 1.2e-13 80.1 79 55.7
QL03p059342 Quercus lobata HOM05D001525 ORTHO05D001397 2.0e-10 69.3 37 81.1
BraA06t23952Z Brassica rapa HOM05D001525 ORTHO05D001397 2.7e-10 68.9 62 54.8
CsaV3_2G024740 Cucumis sativus L. HOM05D001525 ORTHO05D001397 3.5e-10 68.6 37 78.4
FAN12G0845 Fragaria x ananassa HOM05D001525 ORTHO05D001397 3.5e-10 68.6 81 45.7
vmacro16227 Vaccinium macrocarpon HOM05D001525 ORTHO05D001397 3.5e-10 68.6 37 83.8
CiPaw.05G186100 Carya illinoinensis HOM05D001525 ORTHO05D001397 6.0e-10 67.8 37 81.1
Ciclev10033163m.g Citrus clementina HOM05D001525 ORTHO05D001397 6.0e-10 67.8 37 81.1
EL10Ac6g13703 Beta vulgaris HOM05D001525 ORTHO05D001397 7.8e-10 67.4 74 48.6
Dinv35089 Davidia involucrata HOM05D001525 ORTHO05D001397 7.8e-10 67.4 69 52.2
Potri.010G042300 Populus trichocarpa HOM05D001525 ORTHO05D001397 7.8e-10 67.4 46 69.6
CSS0048205 Camellia sinensis var. sinensis HOM05D001525 ORTHO05D001397 1.7e-09 66.2 77 46.8
MD13G1095000 Malus domestica HOM05D001525 ORTHO05D001397 1.7e-09 66.2 37 78.4
Hund25367 Selenicereus undatus HOM05D001525 ORTHO05D001397 1.7e-09 66.2 44 65.9
CiPaw.06G070300 Carya illinoinensis HOM05D001525 ORTHO05D001397 2.3e-09 65.9 37 75.7
MELO3C010673.2 Cucumis melo HOM05D001525 ORTHO05D001397 2.3e-09 65.9 37 75.7
TWI36G0004 Tripterygium wilfordii HOM05D001525 ORTHO05D001397 3.0e-09 65.5 68 50.0
AT1G10657 Arabidopsis thaliana HOM05D001525 ORTHO05D001397 5.0e-09 64.7 64 54.7
Actinidia08153 Actinidia chinensis HOM05D001525 ORTHO05D001397 6.6e-09 64.3 37 78.4
BolC5t29646H Brassica oleracea HOM05D001525 ORTHO05D001397 6.6e-09 64.3 62 51.6
CANSAT01G0732 Cannabis sativa HOM05D001525 ORTHO05D001397 6.6e-09 64.3 46 65.2
ClCG08G017900 Citrullus lanatus HOM05D001525 ORTHO05D001397 6.6e-09 64.3 37 73.0
arahy.Tifrunner.gnm1.ann1.HZY1Y2 Arachis hypogaea HOM05D001525 ORTHO05D001397 8.6e-09 63.9 39 71.8
arahy.Tifrunner.gnm1.ann1.LX3PYU Arachis hypogaea HOM05D001525 ORTHO05D001397 8.6e-09 63.9 39 71.8
Eucgr.I01765 Eucalyptus grandis HOM05D001525 ORTHO05D001397 8.6e-09 63.9 37 75.7
Eucgr.L02704 Eucalyptus grandis HOM05D001525 ORTHO05D001397 8.6e-09 63.9 37 75.7
Manes.15G148900 Manihot esculenta HOM05D001525 ORTHO05D001397 8.6e-09 63.9 57 54.4
Prupe.1G250400 Prunus persica HOM05D001525 ORTHO05D001397 8.6e-09 63.9 37 75.7
RcHm_v2.0_Chr4g0441951 Rosa chinensis HOM05D001525 ORTHO05D001397 1.1e-08 63.5 61 50.8
Sed0023413 Sechium edule HOM05D001525 ORTHO05D001397 1.1e-08 63.5 37 75.7
Carub.0001s1013 Capsella rubella HOM05D001525 ORTHO05D001397 1.5e-08 63.2 47 68.1
Dinv15273 Davidia involucrata HOM05D001525 ORTHO05D001397 1.5e-08 63.2 37 75.7
CARHR010830 Cardamine hirsuta HOM05D001525 ORTHO05D001397 1.9e-08 62.8 47 66.0
MD16G1096100 Malus domestica HOM05D001525 ORTHO05D001397 1.9e-08 62.8 37 73.0
SalBow2G0758 Salvia bowleyana HOM05D001525 ORTHO05D001397 1.9e-08 62.8 37 73.0
BcaB08g37367 Brassica carinata HOM05D001525 ORTHO05D001397 2.5e-08 62.4 37 73.0
Dinv24823 Davidia involucrata HOM05D001525 ORTHO05D001397 2.5e-08 62.4 37 73.0
Manes.12G026600 Manihot esculenta HOM05D001525 ORTHO05D001397 2.5e-08 62.4 37 73.0
MBI16_g37496_MAGBIO Magnolia biondii HOM05D001525 ORTHO05D001397 3.3e-08 62.0 77 45.5
A06p07470 Brassica napus HOM05D001525 ORTHO05D001397 4.3e-08 61.6 47 61.7
Nitab4.5_0001873g0100 Nicotiana tabacum HOM05D001525 ORTHO05D001397 4.3e-08 61.6 94 38.3
GSVIVG01013777001 Vitis vinifera HOM05D001525 ORTHO05D001397 4.3e-08 61.6 37 75.7
FAN22G1299 Fragaria x ananassa HOM05D001525 ORTHO05D001397 5.6e-08 61.2 37 70.3
Sp1g09350 Schrenkiella parvula HOM05D001525 ORTHO05D001397 5.6e-08 61.2 47 63.8
TWI18G0280 Tripterygium wilfordii HOM05D001525 ORTHO05D001397 5.6e-08 61.2 37 70.3
Aqoxy3G02890 Aquilegia oxysepala HOM05D003831 ORTHO05D004440 7.3e-08 60.8 37 75.7
arahy.Tifrunner.gnm1.ann1.JH2BY5 Arachis hypogaea HOM05D001525 ORTHO05D001397 9.5e-08 60.5 37 70.3
arahy.Tifrunner.gnm1.ann1.NIAT1F Arachis hypogaea HOM05D001525 ORTHO05D001397 9.5e-08 60.5 37 70.3
Eucgr.I01761 Eucalyptus grandis HOM05D001525 ORTHO05D001397 9.5e-08 60.5 37 70.3
Nn4g22719 Nelumbo nucifera HOM05D001525 ORTHO05D001397 9.5e-08 60.5 35 74.3
PGR102G0024 Punica granatum HOM05D001525 ORTHO05D001397 9.5e-08 60.5 37 70.3
AL1G21510 Arabidopsis lyrata HOM05D001525 ORTHO05D001397 1.2e-07 60.1 47 63.8
BcaC05g24962 Brassica carinata HOM05D001525 ORTHO05D001397 1.2e-07 60.1 37 73.0
Thecc.02G253900 Theobroma cacao HOM05D001525 ORTHO05D001397 1.2e-07 60.1 37 64.9
Thecc.04G013800 Theobroma cacao HOM05D001525 ORTHO05D001397 1.2e-07 60.1 54 48.1
Duzib264G0550 Durio zibethinus HOM05D001525 ORTHO05D001397 1.6e-07 59.7 37 62.2
Actinidia35759 Actinidia chinensis HOM05D001525 ORTHO05D001397 2.1e-07 59.3 61 47.5
BraA08t35297Z Brassica rapa HOM05D000957 ORTHO05D000754 2.1e-07 59.3 47 59.6
FvH4_4g32920 Fragaria vesca HOM05D001525 ORTHO05D001397 2.1e-07 59.3 37 67.6
PSO478G0643 Papaver somniferum HOM05D001525 ORTHO05D001397 2.1e-07 59.3 37 67.6
Potri.008G189100 Populus trichocarpa HOM05D001525 ORTHO05D001397 2.1e-07 59.3 37 70.3
TAR622G0758 Trochodendron aralioides HOM05D001525 ORTHO05D001397 2.1e-07 59.3 37 73.0
AagrBONN_evm.TU.Sc2ySwM_368.3335 Anthoceros agrestis HOM05D001525 ORTHO05D001397 2.8e-07 58.9 39 64.1
C05p09000 Brassica napus HOM05D001525 ORTHO05D001397 2.8e-07 58.9 47 59.6
Eucgr.B03311 Eucalyptus grandis HOM05D001525 ORTHO05D001397 2.8e-07 58.9 37 67.6
Lalb_Chr16g0392301 Lupinus albus HOM05D001525 ORTHO05D001397 2.8e-07 58.9 46 56.5
Rhsim08G0052500 Rhododendron simsii HOM05D001525 ORTHO05D001397 2.8e-07 58.9 52 51.9
Sabra10G0025100 Salix brachista HOM05D001525 ORTHO05D001397 2.8e-07 58.9 37 73.0
TAR374G0007 Trochodendron aralioides HOM05D003318 ORTHO05D004544 2.8e-07 58.9 38 71.1
Gorai.012G063200 Gossypium raimondii HOM05D001525 ORTHO05D001397 3.6e-07 58.5 37 62.2
Lj4g0003734 Lotus japonicus HOM05D001525 ORTHO05D001397 3.6e-07 58.5 37 64.9
MSTRG.584 Avicennia marina HOM05D001525 ORTHO05D001397 4.7e-07 58.2 37 64.9
CsaV3_5G006690 Cucumis sativus L. HOM05D001525 ORTHO05D001397 4.7e-07 58.2 46 52.2
Gohir.A01G162400 Gossypium hirsutum HOM05D001525 ORTHO05D001397 4.7e-07 58.2 38 63.2
Gohir.D04G179100 Gossypium hirsutum HOM05D001525 ORTHO05D001397 4.7e-07 58.2 54 48.1
Gorai.002G185800 Gossypium raimondii HOM05D001525 ORTHO05D001397 4.7e-07 58.2 37 64.9
Gorai.012G172200 Gossypium raimondii HOM05D001525 ORTHO05D001397 4.7e-07 58.2 54 48.1
Nn3g16827 Nelumbo nucifera HOM05D001525 ORTHO05D001397 4.7e-07 58.2 46 58.7
MELO3C023827.2 Cucumis melo HOM05D001525 ORTHO05D001397 6.2e-07 57.8 46 52.2
Gohir.D01G149700 Gossypium hirsutum HOM05D001525 ORTHO05D001397 6.2e-07 57.8 35 68.6
Hund06006 Selenicereus undatus HOM05D001525 ORTHO05D001397 6.2e-07 57.8 38 63.2
BcaC07g38583 Brassica carinata HOM05D000957 ORTHO05D000754 8.0e-07 57.4 47 57.4
A08p33810 Brassica napus HOM05D002061 ORTHO05D000754 8.0e-07 57.4 47 57.4
C08p13900 Brassica napus HOM05D000957 ORTHO05D000754 8.0e-07 57.4 47 57.4
BolC8t49024H Brassica oleracea HOM05D000957 ORTHO05D000754 8.0e-07 57.4 47 57.4
CDE05G3686 Ceratophyllum demersum HOM05D001525 ORTHO05D001397 8.0e-07 57.4 37 64.9
Cc11_g15340 Coffea canephora HOM05D001525 ORTHO05D001397 8.0e-07 57.4 37 67.6
DCAR_011243 Daucus carota HOM05D001525 ORTHO05D001397 8.0e-07 57.4 52 50.0
Glyma.08G285100 Glycine max HOM05D001525 ORTHO05D001397 8.0e-07 57.4 37 62.2
HanXRQChr17g0539481 Helianthus annuus HOM05D001525 ORTHO05D001397 8.0e-07 57.4 37 70.3
BcaC07g38621 Brassica carinata HOM05D001525 ORTHO05D001397 1.1e-06 57.0 47 59.6
Glyma.18G140500 Glycine max HOM05D001525 ORTHO05D001397 1.1e-06 57.0 37 59.5
Nitab4.5_0000216g0010 Nicotiana tabacum HOM05D001525 ORTHO05D001397 1.1e-06 57.0 78 39.7
Gohir.A04G136000 Gossypium hirsutum HOM05D001525 ORTHO05D001397 1.4e-06 56.6 54 46.3
Gohir.A05G357700 Gossypium hirsutum HOM05D001525 ORTHO05D001397 1.8e-06 56.2 37 59.5
CBR_g70694 Chara braunii HOM05D001525 ORTHO05D001397 2.3e-06 55.8 39 56.4
Migut.E00178 Erythranthe guttata HOM05D001525 ORTHO05D001397 2.3e-06 55.8 37 64.9
Phvul.003G061900 Phaseolus vulgaris HOM05D001525 ORTHO05D001397 2.3e-06 55.8 37 59.5
THA.LOC104809602 Tarenaya hassleriana HOM05D001525 ORTHO05D001397 2.3e-06 55.8 37 62.2
BraA09t41834Z Brassica rapa HOM05D001525 ORTHO05D001397 3.1e-06 55.5 34 73.5
Cfa001542 Carpinus fangiana HOM05D001525 ORTHO05D001397 4.0e-06 55.1 46 47.8
Duzib251G0198 Durio zibethinus HOM05D001525 ORTHO05D001397 4.0e-06 55.1 37 62.2
Oeu055458.1 Olea europaea HOM05D001525 ORTHO05D001397 4.0e-06 55.1 37 64.9
PGSC0003DMG400013512 Solanum tuberosum HOM05D001525 ORTHO05D001397 4.0e-06 55.1 37 67.6
CSS0032891 Camellia sinensis var. sinensis HOM05D001525 ORTHO05D001397 5.2e-06 54.7 39 53.8
Haze_16991 Corylus avellana HOM05D001525 ORTHO05D001397 5.2e-06 54.7 46 50.0
Mapoly0002s0278 Marchantia polymorpha HOM05D001525 ORTHO05D001397 5.2e-06 54.7 82 36.6
Sed0006719 Sechium edule HOM05D001525 ORTHO05D001397 5.2e-06 54.7 46 47.8
VMungo1383G1982 Vigna mungo HOM05D001525 ORTHO05D001397 5.2e-06 54.7 38 52.6
Rhsim03G0128400 Rhododendron simsii HOM05D001525 ORTHO05D001397 6.8e-06 54.3 37 54.1
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 6.8e-06 54.3 37 64.9
Actinidia34343 Actinidia chinensis HOM05D001525 ORTHO05D001397 8.9e-06 53.9 37 54.1
ATR1091G112 Amborella trichopoda HOM05D001525 ORTHO05D001397 8.9e-06 53.9 37 67.6
CDE02G0216 Ceratophyllum demersum HOM05D001525 ORTHO05D001397 8.9e-06 53.9 46 47.8
Duzib147G0041 Durio zibethinus HOM05D001525 ORTHO05D001397 8.9e-06 53.9 34 58.8
Nn2g12872 Nelumbo nucifera HOM05D001525 ORTHO05D001397 8.9e-06 53.9 62 37.1
Solyc05g005230.3 Solanum lycopersicum HOM05D001525 ORTHO05D001397 8.9e-06 53.9 37 64.9


User provided reference genes

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