Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0113800 Rhododendron simsii HOM05D000068 ORTHO05D338340 7.4e-59 230.3 117 100.0
Rhsim01G0002800 Rhododendron simsii HOM05D000068 ORTHO05D007185 1.7e-18 96.3 63 77.8
vmacro13135 Vaccinium macrocarpon HOM05D000068 ORTHO05D007185 1.2e-16 90.1 63 74.6
Dinv41209 Davidia involucrata HOM05D000068 ORTHO05D007185 2.9e-10 68.9 81 58.0
BcaC08g46223 Brassica carinata HOM05D000068 ORTHO05D007185 7.1e-09 64.3 67 52.2
BolC6t39225H Brassica oleracea HOM05D000068 ORTHO05D007185 7.1e-09 64.3 67 52.2
Glyma.08G055000 Glycine max HOM05D000068 ORTHO05D007185 2.1e-08 62.8 56 58.9
Manes.10G090300 Manihot esculenta HOM05D000068 ORTHO05D007185 2.1e-08 62.8 75 52.0
C06p42020 Brassica napus HOM05D000068 ORTHO05D007185 2.7e-08 62.4 67 50.7
A07p34490 Brassica napus HOM05D000068 ORTHO05D007185 3.5e-08 62.0 66 51.5
GSVIVG01029255001 Vitis vinifera HOM05D000068 ORTHO05D007185 6.0e-08 61.2 76 44.7
Hma1.2p1_0235F.1_g098970 Hydrangea macrophylla HOM05D000068 ORTHO05D007185 1.0e-07 60.5 81 44.4
BcaB03g15145 Brassica carinata HOM05D000068 ORTHO05D007185 1.3e-07 60.1 67 50.7
BcaC08g46218 Brassica carinata HOM05D000068 ORTHO05D007185 1.3e-07 60.1 67 50.7
Potri.018G132000 Populus trichocarpa HOM05D000068 ORTHO05D007185 1.7e-07 59.7 75 49.3
TWI60G1694 Tripterygium wilfordii HOM05D000068 ORTHO05D007185 2.3e-07 59.3 64 54.7
Sabra18G0111700 Salix brachista HOM05D000068 ORTHO05D007185 3.9e-07 58.5 63 52.4
VMungo0251G3483 Vigna mungo HOM05D000068 ORTHO05D007185 3.9e-07 58.5 65 52.3
Manes.07G049400 Manihot esculenta HOM05D000068 ORTHO05D007185 5.1e-07 58.2 60 53.3
Actinidia02558 Actinidia chinensis HOM05D000068 ORTHO05D007185 8.6e-07 57.4 83 53.0
AL2G26980 Arabidopsis lyrata HOM05D000068 ORTHO05D007185 8.6e-07 57.4 66 48.5
Carub.0002s1443 Capsella rubella HOM05D000068 ORTHO05D007185 1.1e-06 57.0 66 48.5
AT1G67940 Arabidopsis thaliana HOM05D000068 ORTHO05D007185 1.5e-06 56.6 67 47.8
Haze_19042 Corylus avellana HOM05D000068 ORTHO05D007185 2.5e-06 55.8 77 42.9
Lalb_Chr05g0221611 Lupinus albus HOM05D000068 ORTHO05D007185 2.5e-06 55.8 59 52.5
arahy.Tifrunner.gnm1.ann1.WB8Z1Y Arachis hypogaea HOM05D000086 ORTHO05D007185 3.3e-06 55.5 66 47.0
Haze_19026 Corylus avellana HOM05D000068 ORTHO05D007185 3.3e-06 55.5 64 51.6
Lj4g0027391 Lotus japonicus HOM05D000068 ORTHO05D007185 4.3e-06 55.1 62 54.8
Phvul.002G330700 Phaseolus vulgaris HOM05D000068 ORTHO05D007185 4.3e-06 55.1 49 63.3
Psat4g000120 Pisum sativum HOM05D000068 ORTHO05D007185 4.3e-06 55.1 68 51.5
arahy.Tifrunner.gnm1.ann1.466F5F Arachis hypogaea HOM05D000086 ORTHO05D007185 5.6e-06 54.7 59 50.8
CANSAT21G1866 Cannabis sativa HOM05D000068 ORTHO05D007185 5.6e-06 54.7 63 52.4
Sp5g22980 Schrenkiella parvula HOM05D000068 ORTHO05D007185 5.6e-06 54.7 66 45.5
Thhalv10019008m.g Eutrema salsugineum HOM05D000068 ORTHO05D007185 9.5e-06 53.9 66 43.9
MBI14_g19450_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D007185 9.5e-06 53.9 67 49.3
MBI16_g44477_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D007185 9.5e-06 53.9 77 48.1


User provided reference genes

Program Settings