Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0107400 Rhododendron simsii HOM05D000960 ORTHO05D000683 7.3e-116 420.6 219 100.0
vmacro16149 Vaccinium macrocarpon HOM05D000960 ORTHO05D000683 2.6e-44 183.0 321 40.8
Actinidia15132 Actinidia chinensis HOM05D000960 ORTHO05D000683 1.5e-23 114.0 89 61.8
Dinv14778 Davidia involucrata HOM05D000960 ORTHO05D000683 5.9e-17 92.0 104 54.8
MBI06_g17102_MAGBIO Magnolia biondii HOM05D000960 ORTHO05D000683 1.8e-13 80.5 93 57.0
Sabra10G0017300 Salix brachista HOM05D000960 ORTHO05D000683 1.8e-13 80.5 117 44.4
Potri.010G053200 Populus trichocarpa HOM05D000960 ORTHO05D000683 2.3e-13 80.1 108 50.0
TAR629G0352 Trochodendron aralioides HOM05D000960 ORTHO05D000683 4.4e-12 75.9 95 48.4
Sabra08G0138100 Salix brachista HOM05D000960 ORTHO05D000683 2.2e-11 73.6 125 42.4
Potri.008G180900 Populus trichocarpa HOM05D000960 ORTHO05D000683 2.8e-11 73.2 119 43.7
GSVIVG01010301001 Vitis vinifera HOM05D000960 ORTHO05D000683 2.8e-11 73.2 86 55.8
Potri.001G336300 Populus trichocarpa HOM05D000960 ORTHO05D000683 8.3e-11 71.6 90 46.7
CiPaw.04G032400 Carya illinoinensis HOM05D000960 ORTHO05D000683 1.8e-10 70.5 85 45.9
TAR371G0280 Trochodendron aralioides HOM05D000960 ORTHO05D000683 2.4e-10 70.1 89 48.3
Actinidia36154 Actinidia chinensis HOM05D000960 ORTHO05D000683 3.1e-10 69.7 79 49.4
CsaV3_2G025180 Cucumis sativus L. HOM05D000960 ORTHO05D000683 5.4e-10 68.9 93 46.2
QL02p073263 Quercus lobata HOM05D000960 ORTHO05D000683 7.0e-10 68.6 90 43.3
Oeu054663.1 Olea europaea HOM05D000960 ORTHO05D000683 1.2e-09 67.8 86 50.0
PSO063G0790 Papaver somniferum HOM05D000960 ORTHO05D000683 1.2e-09 67.8 76 56.6
PSO782G5151 Papaver somniferum HOM05D000960 ORTHO05D000683 1.2e-09 67.8 76 56.6
Aqoxy5G03590 Aquilegia oxysepala HOM05D000960 ORTHO05D000683 1.6e-09 67.4 98 46.9
Rhsim08G0046400 Rhododendron simsii HOM05D000960 ORTHO05D000683 1.6e-09 67.4 95 45.3
Ca_04397_v3 Cicer arietinum L. HOM05D000960 ORTHO05D000683 3.5e-09 66.2 83 48.2
arahy.Tifrunner.gnm1.ann1.2V6C5Z Arachis hypogaea HOM05D000960 ORTHO05D000683 5.9e-09 65.5 82 47.6
arahy.Tifrunner.gnm1.ann1.EKVU09 Arachis hypogaea HOM05D000960 ORTHO05D000683 5.9e-09 65.5 82 47.6
arahy.Tifrunner.gnm1.ann1.M5ZV1Q Arachis hypogaea HOM05D000960 ORTHO05D000683 5.9e-09 65.5 82 47.6
arahy.Tifrunner.gnm1.ann1.N991H8 Arachis hypogaea HOM05D000960 ORTHO05D000683 5.9e-09 65.5 82 47.6
Nn4g22466 Nelumbo nucifera HOM05D000960 ORTHO05D000683 5.9e-09 65.5 180 35.0
Solyc02g067950.4 Solanum lycopersicum HOM05D000960 ORTHO05D000683 5.9e-09 65.5 85 47.1
Glyma.05G072200 Glycine max HOM05D000960 ORTHO05D000683 7.8e-09 65.1 81 46.9
Manes.15G155600 Manihot esculenta HOM05D000960 ORTHO05D000683 1.0e-08 64.7 104 42.3
ECA232G3456 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.3e-08 64.3 90 44.4
Medtr6g022230 Medicago truncatula HOM05D000960 ORTHO05D000683 1.3e-08 64.3 85 47.1
Thecc.04G026100 Theobroma cacao HOM05D000960 ORTHO05D000683 1.3e-08 64.3 90 44.4
CSS0003654 Camellia sinensis var. sinensis HOM05D000960 ORTHO05D000683 1.7e-08 63.9 82 46.3
CSS0021929 Camellia sinensis var. sinensis HOM05D000960 ORTHO05D000683 1.7e-08 63.9 87 43.7
CSS0033462 Camellia sinensis var. sinensis HOM05D000960 ORTHO05D000683 1.7e-08 63.9 82 46.3
Manes.17G108100 Manihot esculenta HOM05D000960 ORTHO05D000683 1.7e-08 63.9 87 46.0
TWI36G1777 Tripterygium wilfordii HOM05D000960 ORTHO05D000683 1.7e-08 63.9 88 45.5
CSS0011882 Camellia sinensis var. sinensis HOM05D000960 ORTHO05D000683 2.3e-08 63.5 87 44.8
CAN.G1057.21 Capsicum annuum HOM05D000960 ORTHO05D000683 2.3e-08 63.5 82 47.6
HanXRQChr09g0255771 Helianthus annuus HOM05D000960 ORTHO05D000683 2.3e-08 63.5 101 40.6
PGSC0003DMG400012646 Solanum tuberosum HOM05D000960 ORTHO05D000683 2.3e-08 63.5 85 44.7
MELO3C010715.2 Cucumis melo HOM05D000960 ORTHO05D000683 2.9e-08 63.2 91 41.8
PGSC0003DMG400006967 Solanum tuberosum HOM05D000960 ORTHO05D000683 2.9e-08 63.2 85 45.9
Nitab4.5_0005414g0030 Nicotiana tabacum HOM05D000960 ORTHO05D000683 3.8e-08 62.8 85 44.7
Oeu050442.1 Olea europaea HOM05D000960 ORTHO05D000683 3.8e-08 62.8 95 43.2
Phvul.004G058100 Phaseolus vulgaris HOM05D000960 ORTHO05D000683 3.8e-08 62.8 81 45.7
Solyc02g093720.3 Solanum lycopersicum HOM05D000960 ORTHO05D000683 3.8e-08 62.8 85 45.9
ClCG08G017450 Citrullus lanatus HOM05D000960 ORTHO05D000683 5.0e-08 62.4 88 42.0
Dinv25703 Davidia involucrata HOM05D000960 ORTHO05D000683 5.0e-08 62.4 101 42.6
Glyma.19G055400 Glycine max HOM05D000960 ORTHO05D000683 5.0e-08 62.4 81 45.7
MD17G1019000 Malus domestica HOM05D000960 ORTHO05D000683 5.0e-08 62.4 90 41.1
Atru.chr3.2442 Acer truncatum HOM05D000960 ORTHO05D000683 6.6e-08 62.0 91 45.1
Psat1g083320 Pisum sativum HOM05D000960 ORTHO05D000683 6.6e-08 62.0 83 47.0
Sopen02g038360 Solanum pennellii HOM05D000960 ORTHO05D000683 6.6e-08 62.0 83 47.0
arahy.Tifrunner.gnm1.ann1.C5JWME Arachis hypogaea HOM05D000960 ORTHO05D000683 8.6e-08 61.6 82 45.1
CiPaw.03G049500 Carya illinoinensis HOM05D000960 ORTHO05D000683 8.6e-08 61.6 103 39.8
MD09G1018500 Malus domestica HOM05D000960 ORTHO05D000683 8.6e-08 61.6 90 40.0
VMungo0464G0206 Vigna mungo HOM05D000960 ORTHO05D000683 8.6e-08 61.6 81 43.2
vmacro18310 Vaccinium macrocarpon HOM05D000960 ORTHO05D000683 1.1e-07 61.2 99 41.4
Gohir.A03G130400 Gossypium hirsutum HOM05D000960 ORTHO05D000683 1.9e-07 60.5 92 47.8
Nitab4.5_0000040g0500 Nicotiana tabacum HOM05D000960 ORTHO05D000683 1.9e-07 60.5 85 43.5
Peaxi162Scf00080g01719 Petunia axillaris HOM05D000960 ORTHO05D000683 1.9e-07 60.5 85 44.7
Eucgr.J02275 Eucalyptus grandis HOM05D000960 ORTHO05D000683 2.5e-07 60.1 89 44.9
GSVIVG01003969001 Vitis vinifera HOM05D000960 ORTHO05D000683 2.5e-07 60.1 88 46.6
Cfa009283 Carpinus fangiana HOM05D000960 ORTHO05D000683 3.3e-07 59.7 101 42.6
Dinv11014 Davidia involucrata HOM05D000960 ORTHO05D000683 4.3e-07 59.3 90 47.8
Nn3g16583 Nelumbo nucifera HOM05D000960 ORTHO05D000683 4.3e-07 59.3 179 34.1
Migut.K01433 Erythranthe guttata HOM05D000960 ORTHO05D000683 5.6e-07 58.9 86 44.2
Gohir.D02G154100 Gossypium hirsutum HOM05D000960 ORTHO05D000683 5.6e-07 58.9 92 47.8
CANSAT64G2593 Cannabis sativa HOM05D000960 ORTHO05D000683 7.3e-07 58.5 85 43.5
Sed0010444 Sechium edule HOM05D000960 ORTHO05D000683 7.3e-07 58.5 75 48.0
Lj2g0008797 Lotus japonicus HOM05D000960 ORTHO05D000683 9.5e-07 58.2 82 43.9
CsaV3_5G026790 Cucumis sativus L. HOM05D000960 ORTHO05D000683 1.2e-06 57.8 75 46.7
SEGI_11730 Sequoiadendron giganteum HOM05D000778 ORTHO05D000601 1.2e-06 57.8 88 46.6
MSTRG.26006 Avicennia marina HOM05D000778 ORTHO05D000601 1.6e-06 57.4 77 49.4
CiPaw.05G174900 Carya illinoinensis HOM05D000960 ORTHO05D000683 1.6e-06 57.4 102 40.2
Eucgr.C01741 Eucalyptus grandis HOM05D000778 ORTHO05D000601 1.6e-06 57.4 76 51.3
Gohir.D07G232400 Gossypium hirsutum HOM05D000960 ORTHO05D000683 1.6e-06 57.4 90 42.2
Gorai.005G173200 Gossypium raimondii HOM05D000960 ORTHO05D000683 1.6e-06 57.4 92 46.7
Sopen02g017080 Solanum pennellii HOM05D000960 ORTHO05D000683 1.6e-06 57.4 95 42.1
Cpa.g.sc130.49 Carica papaya HOM05D000960 ORTHO05D000683 2.1e-06 57.0 83 43.4
SalBow7G1427 Salvia bowleyana HOM05D000960 ORTHO05D000683 2.1e-06 57.0 82 46.3
MBI04_g29346_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 2.8e-06 56.6 157 35.7
vmacro05910 Vaccinium macrocarpon HOM05D000960 ORTHO05D000683 2.8e-06 56.6 97 39.2
Ciclev10033764m.g Citrus clementina HOM05D000960 ORTHO05D000683 3.6e-06 56.2 210 30.5
Actinidia05949 Actinidia chinensis HOM05D000960 ORTHO05D000683 4.7e-06 55.8 94 41.5
Actinidia18426 Actinidia chinensis HOM05D000960 ORTHO05D000683 4.7e-06 55.8 81 40.7
SGA_v2.0_scaffold64G21928 Striga asiatica HOM05D000778 ORTHO05D000601 6.1e-06 55.5 79 46.8


User provided reference genes

Program Settings