Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.9e-83 312.4 153 100.0
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 2.3e-39 166.0 179 57.5
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.9e-38 162.9 165 57.6
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 5.6e-38 161.4 151 58.3
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 8.0e-37 157.5 153 58.8
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 5.2e-36 154.8 157 58.0
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 3.4e-35 152.1 156 56.4
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 4.4e-35 151.8 159 54.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 4.9e-34 148.3 128 61.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 8.3e-34 147.5 153 54.2
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.8e-33 146.4 126 61.9
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 2.4e-33 146.0 118 63.6
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.2e-32 143.7 150 54.7
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 2.7e-32 142.5 152 53.9
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 4.6e-32 141.7 155 53.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 7.8e-32 141.0 125 59.2
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.0e-31 140.6 156 52.6
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.3e-31 140.2 121 58.7
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 2.3e-31 139.4 118 61.0
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 5.0e-31 138.3 117 60.7
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.1e-30 137.1 116 62.9
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-30 136.0 115 60.9
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.5e-30 136.0 112 59.8
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.5e-30 136.0 126 57.9
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 4.3e-30 135.2 155 49.7
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 9.5e-30 134.0 115 60.9
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 9.5e-30 134.0 147 52.4
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 9.5e-30 134.0 104 60.6
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.2e-29 133.7 148 51.4
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.2e-29 133.7 115 60.0
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.2e-29 133.7 99 64.6
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.6e-29 133.3 145 53.1
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.8e-29 132.5 100 62.0
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.8e-29 132.5 146 49.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 3.6e-29 132.1 146 50.7
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 3.6e-29 132.1 146 49.3
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.2e-29 131.3 99 60.6
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 8.0e-29 131.0 155 49.7
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 8.0e-29 131.0 100 63.0
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.0e-28 130.6 100 61.0
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.0e-28 130.6 152 48.7
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.4e-28 130.2 107 58.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.4e-28 130.2 156 50.6
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.4e-28 130.2 151 48.3
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.4e-28 130.2 124 53.2
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.8e-28 129.8 165 46.7
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.8e-28 129.8 149 52.3
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.8e-28 129.8 154 50.6
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 2.3e-28 129.4 149 52.3
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 4.0e-28 128.6 132 50.8
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 6.8e-28 127.9 99 60.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 6.8e-28 127.9 133 51.9
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 6.8e-28 127.9 121 52.9
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.2e-27 127.1 111 55.0
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.5e-27 126.7 99 61.6
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 2.6e-27 125.9 111 57.7
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 4.4e-27 125.2 113 54.9
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.4e-27 125.2 126 54.0
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.3e-26 123.6 109 57.8
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.3e-26 123.6 109 57.8
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.3e-26 123.6 114 54.4
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.3e-26 123.6 114 55.3
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.7e-26 123.2 114 54.4
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.7e-26 123.2 114 54.4
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.7e-26 123.2 116 51.7
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.7e-26 123.2 120 52.5
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 2.2e-26 122.9 114 53.5
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 2.2e-26 122.9 114 54.4
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 2.9e-26 122.5 114 54.4
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.9e-26 122.5 133 51.1
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 4.9e-26 121.7 123 53.7
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 6.4e-26 121.3 135 48.1
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 6.4e-26 121.3 152 48.0
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 6.4e-26 121.3 140 50.0
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 6.4e-26 121.3 99 57.6
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 8.3e-26 120.9 112 51.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 8.3e-26 120.9 141 47.5
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 8.3e-26 120.9 98 57.1
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 8.3e-26 120.9 114 52.6
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.4e-25 120.2 99 56.6
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.9e-25 119.8 101 56.4
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.4e-25 119.4 114 51.8
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 2.0e-24 116.3 112 51.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.7e-24 115.9 129 47.3
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 4.6e-24 115.2 125 48.0
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.7e-23 113.2 161 43.5
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 3.0e-23 112.5 141 47.5
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 5.0e-23 111.7 114 48.2
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 8.6e-23 110.9 153 43.8
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.5e-22 110.2 85 62.4
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 5.2e-20 101.7 118 47.5
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.0e-19 99.8 102 47.1
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.6e-13 80.1 99 41.4
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.8e-13 79.3 98 45.9
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 3.6e-13 79.0 92 46.7
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 6.8e-12 74.7 119 37.0
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 8.9e-12 74.3 95 37.9
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.7e-10 70.1 39 76.9
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 2.2e-10 69.7 39 76.9
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 3.8e-10 68.9 104 44.2
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 3.8e-10 68.9 44 63.6
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 4.9e-10 68.6 39 74.4
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.1e-09 67.4 113 37.2
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.2e-09 65.9 34 79.4
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 7.1e-09 64.7 34 82.4
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.7e-08 62.8 33 84.8
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 1.0e-07 60.8 42 59.5


User provided reference genes

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