Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 0.0e+00 1080.9 535 100.0
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.6e-233 812.8 494 84.0
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 8.2e-230 800.4 452 88.1
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 2.9e-227 792.0 453 86.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.2e-222 775.8 448 85.0
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 2.9e-219 765.4 500 80.2
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.1e-218 763.5 414 90.1
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 7.2e-218 760.8 448 82.8
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.8e-216 756.1 448 83.0
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 2.3e-216 755.7 448 81.9
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.7e-214 749.6 474 80.0
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 2.8e-214 748.8 456 80.5
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 2.8e-214 748.8 456 79.8
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 8.3e-214 747.3 448 81.0
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 8.3e-214 747.3 448 81.5
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.8e-213 746.1 452 79.9
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.8e-213 746.1 448 80.8
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 5.4e-213 744.6 459 79.1
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.0e-213 744.2 448 80.1
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.2e-212 743.4 448 81.9
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.5e-212 741.5 450 79.8
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 4.5e-212 741.5 448 80.1
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 7.8e-212 740.7 448 80.6
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.0e-211 740.3 473 77.4
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.0e-211 740.3 448 79.9
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.3e-211 740.0 448 81.9
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.7e-211 739.6 450 79.1
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.7e-211 739.6 448 81.5
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.3e-211 739.2 448 79.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.0e-211 738.0 450 81.1
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 8.6e-211 737.3 448 80.6
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.5e-210 736.5 450 82.2
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.5e-210 736.5 448 80.6
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.6e-210 734.6 449 78.8
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 9.5e-210 733.8 437 81.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-209 733.0 459 78.6
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 3.6e-209 731.9 448 79.9
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 4.7e-209 731.5 449 78.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.0e-208 730.3 479 75.4
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.4e-208 729.9 448 79.9
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 3.0e-208 728.8 457 78.6
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.5e-207 726.5 449 77.3
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 3.4e-207 725.3 448 79.2
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 5.7e-207 724.5 453 77.7
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.3e-206 723.4 448 77.5
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 3.2e-205 718.8 452 78.1
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.0e-204 716.1 453 76.6
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 2.7e-204 715.7 448 77.9
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 5.9e-204 714.5 433 80.8
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.3e-203 713.4 448 78.3
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.7e-203 713.0 448 77.9
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 3.9e-203 711.8 454 74.4
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 5.0e-203 711.4 448 77.9
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.1e-202 710.3 452 77.0
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 3.3e-202 708.8 431 78.7
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 5.6e-202 708.0 453 74.2
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 5.6e-202 708.0 448 78.1
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 5.6e-202 708.0 452 76.8
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 9.5e-202 707.2 453 75.3
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.6e-201 705.3 467 74.1
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 4.7e-201 704.9 447 76.3
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.4e-200 703.4 450 76.2
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.3e-200 702.6 409 85.6
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.1e-200 702.2 450 78.0
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 5.2e-200 701.4 454 73.6
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 8.9e-200 700.7 454 75.6
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.0e-199 699.5 454 74.7
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.6e-199 699.1 454 74.4
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 3.4e-199 698.7 450 74.4
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 4.4e-199 698.4 453 72.8
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 5.8e-199 698.0 453 73.1
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.9e-198 695.7 470 71.1
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 4.9e-198 694.9 453 73.5
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 6.4e-198 694.5 455 73.0
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.2e-197 692.2 448 75.0
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 9.2e-197 690.6 453 73.1
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 3.5e-196 688.7 448 73.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 6.0e-196 688.0 453 73.3
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 6.0e-196 688.0 462 71.9
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 6.0e-196 688.0 470 70.2
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 6.0e-196 688.0 454 72.9
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.0e-195 687.2 452 75.2
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.3e-195 686.8 479 69.3
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.7e-195 686.4 452 75.4
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 3.9e-195 685.3 455 72.7
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.5e-194 683.3 444 74.5
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 6.2e-193 677.9 455 72.7
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 2.3e-192 676.0 467 72.4
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 5.2e-192 674.9 453 75.1
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 8.9e-192 674.1 448 75.9
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 7.1e-189 664.5 484 71.3
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 2.1e-185 652.9 482 67.4
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.4e-184 650.2 448 71.7
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.4e-184 650.2 415 76.1
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 7.6e-183 644.4 464 67.7
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 3.0e-179 632.5 415 72.5
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.4e-176 623.6 410 74.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.5e-175 620.2 386 76.4
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.7e-174 616.7 463 66.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 5.4e-173 611.7 451 68.7
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.6e-171 604.7 463 67.4
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 8.7e-171 604.4 382 78.3
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.2e-169 598.2 457 66.3
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 8.1e-161 571.2 321 86.6
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.2e-158 563.1 429 62.7
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 9.3e-157 557.8 446 60.8
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.1e-154 550.8 433 59.8
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 1.0e-150 537.7 430 61.4
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 4.1e-144 515.8 428 57.5
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-137 494.2 457 59.5
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.6e-132 477.2 271 82.7
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.2e-125 453.0 461 57.0
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 7.2e-117 425.2 434 48.2
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 2.7e-108 396.7 425 48.2
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.1e-101 374.8 317 62.1
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 6.8e-99 365.5 370 55.1
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 8.9e-91 338.6 182 87.9
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.7e-87 327.0 476 39.1
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.1e-60 237.7 340 42.6
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 2.4e-59 234.2 191 66.0
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.6e-55 221.5 108 91.7
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.3e-54 218.4 382 39.3
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 8.4e-49 199.1 393 37.4
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.8e-43 181.4 124 75.0
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 6.9e-43 179.5 124 74.2
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.0e-38 164.1 137 63.5
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 3.9e-30 137.1 101 65.3
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 8.7e-30 136.0 114 54.4
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.5e-29 135.2 126 54.0
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 9.4e-24 115.9 74 67.6
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 6.1e-23 113.2 83 65.1
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 9.7e-21 105.9 192 31.8
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 4.8e-20 103.6 104 55.8
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.1e-19 102.4 69 69.6
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 2.6e-18 97.8 69 65.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.3e-17 95.5 61 77.0
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 2.2e-17 94.7 101 52.5
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.2e-15 89.0 56 78.6


User provided reference genes

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