Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 8.6e-69 263.5 127 100.0
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 5.2e-66 254.2 137 92.0
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 7.4e-36 154.1 83 86.7
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 1.4e-18 96.7 60 66.7
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 9.0e-18 94.0 61 63.9
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 2.0e-17 92.8 60 66.7
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 2.6e-17 92.4 60 63.3
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 4.5e-17 91.7 60 65.0
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 2.2e-16 89.4 61 63.9
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 2.2e-16 89.4 61 67.2
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 2.9e-16 89.0 61 67.2
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 2.9e-16 89.0 60 60.0
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 3.8e-16 88.6 60 63.3
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 5.0e-16 88.2 61 62.3
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 5.0e-16 88.2 61 63.9
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 5.0e-16 88.2 61 65.6
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 6.5e-16 87.8 61 63.9
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 6.5e-16 87.8 61 63.9
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 8.5e-16 87.4 61 62.3
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 1.1e-15 87.0 61 63.9
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.9e-15 86.3 61 63.9
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 2.5e-15 85.9 60 60.0
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 3.2e-15 85.5 61 62.3
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 4.2e-15 85.1 61 59.0
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 9.4e-15 84.0 61 57.4
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.2e-14 83.6 60 58.3
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 1.6e-14 83.2 60 60.0
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 1.6e-14 83.2 61 60.7
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 2.1e-14 82.8 61 55.7
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 2.7e-14 82.4 61 55.7
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 2.7e-14 82.4 61 57.4
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 2.7e-14 82.4 60 60.0
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 3.6e-14 82.0 61 55.7
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 8.8e-13 77.4 61 57.4
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 1.5e-12 76.6 82 47.6
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 1.9e-12 76.3 62 53.2
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 1.9e-12 76.3 35 80.0
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 3.3e-12 75.5 61 52.5
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 3.3e-12 75.5 60 55.0
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 9.7e-12 73.9 61 57.4
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 2.8e-11 72.4 52 57.7
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 1.1e-10 70.5 59 55.9
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 2.4e-10 69.3 62 51.6
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 3.1e-10 68.9 48 62.5
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 3.1e-10 68.9 63 54.0
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 4.1e-10 68.6 70 47.1
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 6.9e-10 67.8 77 50.6
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 6.9e-10 67.8 59 52.5
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 2.0e-09 66.2 61 47.5
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 5.9e-09 64.7 88 43.2
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 6.5e-08 61.2 61 45.9
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 6.5e-08 61.2 61 47.5
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 8.5e-08 60.8 36 63.9
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 7.2e-07 57.8 79 38.0
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 1.2e-06 57.0 82 37.8
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.1e-06 56.2 61 42.6
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 6.1e-06 54.7 51 43.1


User provided reference genes

Program Settings