Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.6e-73 279.3 136 100.0
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 5.9e-23 111.3 68 83.8
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.7e-19 97.8 54 92.6
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 9.1e-16 87.4 54 83.3
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 3.4e-15 85.5 52 82.7
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 3.4e-15 85.5 52 80.8
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 7.7e-15 84.3 53 75.5
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 7.7e-15 84.3 52 78.8
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.3e-14 83.6 67 65.7
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.7e-14 83.2 64 70.3
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 1.7e-14 83.2 50 84.0
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.7e-14 83.2 53 79.2
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.7e-14 83.2 53 83.0
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 2.9e-14 82.4 80 55.0
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 3.8e-14 82.0 53 77.4
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 3.8e-14 82.0 67 64.2
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 5.0e-14 81.6 50 80.0
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 6.5e-14 81.3 52 78.8
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 8.5e-14 80.9 53 79.2
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 8.5e-14 80.9 52 78.8
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.4e-13 80.1 53 77.4
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.4e-13 80.1 53 77.4
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 1.4e-13 80.1 53 77.4
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.4e-13 80.1 67 62.7
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 1.4e-13 80.1 53 77.4
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 1.4e-13 80.1 53 77.4
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.9e-13 79.7 51 78.4
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.9e-13 79.7 65 61.5
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 2.5e-13 79.3 53 77.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 3.2e-13 79.0 53 73.6
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 3.2e-13 79.0 53 73.6
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.2e-13 78.6 49 79.6
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.2e-13 78.6 49 79.6
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 4.2e-13 78.6 80 53.8
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 4.2e-13 78.6 79 53.2
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 4.2e-13 78.6 53 75.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 5.5e-13 78.2 54 74.1
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 5.5e-13 78.2 52 76.9
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 5.5e-13 78.2 52 76.9
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 5.5e-13 78.2 53 75.5
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 5.5e-13 78.2 80 53.8
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 7.2e-13 77.8 52 75.0
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 9.4e-13 77.4 50 80.0
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 9.4e-13 77.4 53 75.5
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 9.4e-13 77.4 67 58.2
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 9.4e-13 77.4 52 75.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 1.2e-12 77.0 52 75.0
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.6e-12 76.6 53 71.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 2.1e-12 76.3 52 75.0
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.7e-12 75.9 53 71.7
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 2.7e-12 75.9 50 76.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 3.6e-12 75.5 53 75.5
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 1.0e-11 73.9 52 71.2
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.0e-11 73.9 62 62.9
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.0e-11 73.9 53 71.7
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 1.0e-11 73.9 52 73.1
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 1.4e-11 73.6 53 71.7
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.4e-11 73.6 53 69.8
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 1.4e-11 73.6 53 71.7
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.8e-11 73.2 60 65.0
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 2.3e-11 72.8 52 71.2
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 2.3e-11 72.8 49 73.5
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 3.0e-11 72.4 53 71.7
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.0e-11 72.4 53 71.7
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.0e-11 72.4 53 71.7
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 3.0e-11 72.4 54 66.7
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 6.7e-11 71.2 67 56.7
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 6.7e-11 71.2 51 68.6
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 6.7e-11 71.2 53 71.7
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 6.7e-11 71.2 53 69.8
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 6.7e-11 71.2 53 69.8
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 2.6e-10 69.3 67 49.3
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 2.6e-10 69.3 53 67.9
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 3.3e-10 68.9 66 54.5
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 3.3e-10 68.9 52 69.2
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 4.4e-10 68.6 66 53.0
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 5.7e-10 68.2 53 66.0
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 5.7e-10 68.2 66 54.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 5.7e-10 68.2 53 64.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 7.4e-10 67.8 66 54.5
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.4e-10 67.8 53 64.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.4e-10 67.8 49 65.3
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 9.7e-10 67.4 53 60.4
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 9.7e-10 67.4 66 53.0
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.3e-09 67.0 65 50.8
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 1.3e-09 67.0 54 63.0
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 2.2e-09 66.2 66 53.0
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 2.2e-09 66.2 66 53.0
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 2.2e-09 66.2 66 53.0
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 2.2e-09 66.2 48 68.8
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 2.2e-09 66.2 66 54.5
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.2e-09 66.2 53 62.3
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.8e-09 65.9 49 63.3
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 3.7e-09 65.5 53 56.6
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 3.7e-09 65.5 66 53.0
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 6.3e-09 64.7 48 66.7
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 6.3e-09 64.7 49 67.3
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.4e-08 63.5 53 62.3
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.1e-08 62.4 51 60.8
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 3.1e-08 62.4 67 47.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 5.3e-08 61.6 52 57.7
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 4.5e-07 58.5 55 50.9
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 3.8e-06 55.5 40 60.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 5.0e-06 55.1 43 58.1


User provided reference genes

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