Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 9.2e-220 766.5 375 100.0
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 1.1e-98 364.4 220 82.7
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 5.4e-95 352.1 225 77.8
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 1.3e-93 347.4 223 74.9
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 3.0e-93 346.3 218 74.3
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 5.1e-93 345.5 225 76.0
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 8.7e-93 344.7 231 73.2
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 1.1e-90 337.8 225 73.3
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 2.4e-90 336.7 225 74.2
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 9.0e-90 334.7 216 78.2
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 4.5e-89 332.4 224 74.1
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 2.2e-88 330.1 216 73.6
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 3.2e-87 326.2 225 73.8
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 1.2e-86 324.3 216 75.9
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 1.2e-86 324.3 239 68.6
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 2.7e-86 323.2 225 73.8
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 3.5e-86 322.8 215 74.0
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 4.6e-86 322.4 220 72.3
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 1.0e-85 321.2 223 70.0
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 3.9e-85 319.3 223 70.4
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 5.1e-85 318.9 220 71.8
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 5.1e-85 318.9 224 71.0
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 5.1e-85 318.9 225 69.3
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 6.7e-85 318.5 216 74.1
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 8.7e-85 318.2 216 73.6
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.1e-84 317.8 223 69.1
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 1.5e-84 317.4 217 69.6
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 1.9e-84 317.0 222 71.6
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 3.3e-84 316.2 217 71.0
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 4.3e-84 315.8 221 68.8
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 7.4e-84 315.1 220 69.5
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 9.6e-84 314.7 216 69.0
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 9.6e-84 314.7 214 72.0
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 1.3e-83 314.3 227 69.2
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 1.3e-83 314.3 227 69.2
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 1.3e-83 314.3 225 70.2
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 1.6e-83 313.9 226 67.7
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 2.1e-83 313.5 220 71.4
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 2.8e-83 313.2 207 77.8
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 2.8e-83 313.2 225 69.3
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 3.7e-83 312.8 225 69.3
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 1.1e-82 311.2 231 67.5
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 1.1e-82 311.2 217 71.4
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 1.8e-82 310.5 221 68.3
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 2.4e-82 310.1 220 69.5
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 2.4e-82 310.1 218 70.6
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 3.1e-82 309.7 216 70.8
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 3.1e-82 309.7 221 67.9
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 4.0e-82 309.3 221 67.9
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 5.3e-82 308.9 216 71.3
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 9.0e-82 308.1 216 71.3
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 9.0e-82 308.1 216 70.8
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 1.2e-81 307.8 216 70.8
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.5e-81 307.4 216 72.2
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 2.6e-81 306.6 225 67.6
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 1.0e-80 304.7 216 70.4
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 2.2e-80 303.5 215 69.3
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 3.8e-80 302.8 399 48.4
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 6.5e-80 302.0 216 68.5
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 1.9e-79 300.4 217 70.0
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 1.9e-79 300.4 207 70.5
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 4.2e-79 299.3 219 68.9
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 5.5e-79 298.9 223 66.4
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 5.5e-79 298.9 216 68.1
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 7.1e-79 298.5 211 70.6
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 9.3e-79 298.1 217 69.1
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 1.2e-78 297.7 214 68.2
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 2.1e-78 297.0 217 69.6
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 2.7e-78 296.6 219 67.1
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 3.5e-78 296.2 219 67.1
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 4.6e-78 295.8 217 69.1
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 6.0e-78 295.4 217 68.7
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 1.0e-77 294.7 217 68.7
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 1.3e-77 294.3 218 68.3
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 1.3e-77 294.3 223 66.4
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 1.3e-77 294.3 218 67.9
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 1.3e-77 294.3 207 70.0
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 2.3e-77 293.5 217 68.2
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 2.3e-77 293.5 217 68.2
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 2.3e-77 293.5 216 66.2
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 3.0e-77 293.1 217 67.7
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 3.0e-77 293.1 218 67.4
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 5.1e-77 292.4 221 64.3
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 2.5e-76 290.0 218 66.5
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 3.3e-76 289.7 257 58.4
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 4.3e-76 289.3 266 57.5
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 7.4e-76 288.5 221 65.6
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 9.6e-76 288.1 223 65.9
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 2.8e-75 286.6 211 66.8
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 6.2e-75 285.4 215 67.0
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.8e-74 283.9 286 54.2
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 1.8e-74 283.9 213 65.3
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 7.6e-73 278.5 202 70.3
CSS0003180 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 7.6e-73 278.5 209 66.0
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 7.6e-73 278.5 209 66.0
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 7.6e-73 278.5 179 72.1
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 1.0e-72 278.1 206 66.0
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 9.3e-71 271.6 201 69.2
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 6.1e-70 268.9 212 61.8
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 3.9e-69 266.2 164 80.5
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 8.7e-69 265.0 212 62.3
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 8.7e-69 265.0 209 60.8
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 2.5e-68 263.5 201 62.2
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 2.5e-68 263.5 184 71.2
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 5.7e-68 262.3 201 60.7
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 7.4e-68 261.9 208 61.5
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 3.7e-67 259.6 220 60.5
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 3.7e-67 259.6 225 64.4
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 1.8e-66 257.3 217 62.7
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 2.2e-64 250.4 171 70.8
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 2.9e-64 250.0 217 61.8
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 3.8e-64 249.6 198 63.6
DCAR_019172 Daucus carota HOM05D004548 ORTHO05D005402 5.0e-64 249.2 161 73.9
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 1.1e-63 248.1 178 70.8
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 1.2e-62 244.6 213 61.0
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 4.6e-62 242.7 178 66.9
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 6.1e-62 242.3 164 71.3
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 5.7e-60 235.7 192 65.1
Mapoly0026s0030 Marchantia polymorpha HOM05D004548 ORTHO05D005402 5.7e-60 235.7 210 56.2
Pp3c9_19720 Physcomitrium patens HOM05D004548 ORTHO05D005402 6.3e-59 232.3 220 55.9
Ciclev10029254m.g Citrus clementina HOM05D004548 ORTHO05D005402 8.2e-59 231.9 204 56.4
Ciclev10002435m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.4e-58 231.1 211 54.0
Psat1g039080 Pisum sativum HOM05D004548 ORTHO05D005402 5.3e-58 229.2 164 70.1
Cfa009469 Carpinus fangiana HOM05D004548 ORTHO05D005402 1.3e-56 224.6 150 73.3
SMO119G0501 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 1.3e-56 224.6 214 53.7
Zm00001eb126960 Zea mays HOM05D004548 ORTHO05D005402 1.3e-56 224.6 221 52.9
MD16G1144400 Malus domestica HOM05D004548 ORTHO05D005402 1.7e-56 224.2 148 75.7
AUR62011188 Chenopodium quinoa HOM05D004548 ORTHO05D005402 1.9e-55 220.7 168 60.1
SMO196G0274 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 2.1e-54 217.2 202 53.0
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 3.9e-53 213.0 225 52.9
C05p18540 Brassica napus HOM05D004548 ORTHO05D005402 1.1e-52 211.5 219 55.7
EL10Ac8g18743 Beta vulgaris HOM05D004548 ORTHO05D005402 1.7e-51 207.6 210 47.6
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis HOM05D004548 ORTHO05D005402 1.2e-49 201.4 198 49.5
BcaC05g25899 Brassica carinata HOM05D004548 ORTHO05D005402 7.2e-47 192.2 219 52.5
Ciclev10006027m.g Citrus clementina HOM05D004548 ORTHO05D005402 8.2e-43 178.7 148 53.4
Cre12.g557900 Chlamydomonas reinhardtii HOM05D004548 ORTHO05D005402 2.6e-41 173.7 214 40.7
EL10Ac8g18745 Beta vulgaris HOM05D004548 ORTHO05D005402 7.7e-41 172.2 210 42.4
Rhsim12G0091000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-40 171.8 118 70.3
Ah.14g079290 Amaranthus hybridus HOM05D004548 ORTHO05D005402 2.5e-39 167.2 215 43.7
Ah.09g224580 Amaranthus hybridus HOM05D004548 ORTHO05D005402 9.4e-39 165.2 213 45.1
Actinidia09588 Actinidia chinensis HOM05D004548 ORTHO05D005402 1.6e-38 164.5 133 65.4
SEGI_03556 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 2.1e-38 164.1 157 52.9
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-37 158.7 118 65.3
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-37 158.7 118 65.3
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-37 158.7 118 65.3
Sabra01G0049300 Salix brachista HOM05D004548 ORTHO05D000739 2.6e-36 157.1 103 75.7
Oeu051508.1 Olea europaea HOM05D004548 ORTHO05D005402 2.2e-35 154.1 95 75.8
EL10Ac8g18747 Beta vulgaris HOM05D004548 ORTHO05D005402 8.3e-35 152.1 179 42.5
Potri.001G070301 Populus trichocarpa HOM05D004548 ORTHO05D005402 7.0e-34 149.1 105 69.5
Mapoly0072s0066 Marchantia polymorpha HOM05D004548 ORTHO05D005402 2.0e-33 147.5 209 40.7
EL10Ac8g18746 Beta vulgaris HOM05D004548 ORTHO05D005402 7.2e-31 139.0 212 38.7
EL10Ac8g18744 Beta vulgaris HOM05D004548 ORTHO05D005402 4.0e-29 133.3 203 37.4
FAN12G3080 Fragaria x ananassa HOM05D004548 ORTHO05D005402 8.8e-29 132.1 188 44.1
CBR_g55168 Chara braunii HOM05D004548 ORTHO05D005402 9.8e-28 128.6 127 49.6
Psat5g295440 Pisum sativum HOM05D004548 ORTHO05D005402 3.5e-25 120.2 91 62.6
Nitab4.5_0000038g0240 Nicotiana tabacum HOM05D004548 ORTHO05D005402 4.5e-25 119.8 90 63.3
COL.COLO4_05696 Corchorus olitorius HOM05D004548 ORTHO05D005402 2.8e-22 110.5 88 61.4
Oeu018311.3 Olea europaea HOM05D004548 ORTHO05D005402 7.3e-15 85.9 198 36.4
MELO3C030902.2 Cucumis melo HOM05D004548 ORTHO05D005402 2.1e-14 84.3 85 54.1
Ah.16g106680 Amaranthus hybridus HOM05D004548 ORTHO05D005402 2.6e-12 77.4 65 60.0
Cpa.g.sc38.60 Carica papaya HOM05D004548 ORTHO05D005402 4.6e-09 66.6 43 76.7


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