Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 6.3e-85 317.4 158 100.0
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 2.5e-49 199.1 278 47.5
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 3.4e-46 188.7 189 56.6
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 6.3e-45 184.5 190 54.7
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 1.2e-43 180.3 187 52.9
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 2.7e-43 179.1 178 57.3
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 1.3e-42 176.8 188 54.8
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 9.5e-41 170.6 177 55.4
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 8.0e-40 167.5 177 53.7
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 8.0e-40 167.5 177 53.7
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.0e-39 167.2 190 49.5
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 1.4e-39 166.8 189 52.4
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 1.8e-39 166.4 177 52.5
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.8e-39 166.4 190 49.5
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 2.3e-39 166.0 190 51.1
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 3.0e-39 165.6 177 53.1
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 4.0e-39 165.2 190 50.5
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 5.2e-39 164.9 189 49.7
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 3.4e-38 162.2 189 49.2
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 4.4e-38 161.8 190 48.9
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 4.4e-38 161.8 177 52.0
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 5.7e-38 161.4 176 53.4
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 9.8e-38 160.6 187 49.2
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 2.2e-37 159.5 190 48.4
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 6.3e-37 157.9 188 45.7
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 6.3e-37 157.9 185 49.2
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 1.4e-36 156.8 190 48.9
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 1.8e-36 156.4 187 50.8
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 3.1e-36 155.6 190 47.4
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 4.1e-36 155.2 174 50.0
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 5.4e-36 154.8 187 49.7
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 5.4e-36 154.8 188 49.5
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 7.0e-36 154.5 191 48.7
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 7.0e-36 154.5 190 46.8
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 1.6e-35 153.3 177 49.7
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 4.5e-35 151.8 186 48.9
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 5.9e-35 151.4 157 52.2
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 5.0e-34 148.3 190 45.3
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 5.0e-34 148.3 188 47.3
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 5.0e-34 148.3 157 49.0
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 6.6e-34 147.9 191 46.1
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 6.6e-34 147.9 172 45.9
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 8.6e-34 147.5 189 46.0
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 8.6e-34 147.5 193 47.2
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 1.9e-33 146.4 186 46.8
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 5.6e-33 144.8 190 45.3
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 7.3e-33 144.4 189 46.0
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 9.5e-33 144.1 190 44.2
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 9.5e-33 144.1 189 45.5
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 1.2e-32 143.7 173 47.4
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 3.6e-32 142.1 188 45.2
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 1.4e-31 140.2 124 59.7
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 1.8e-31 139.8 191 43.5
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 3.0e-31 139.0 186 45.7
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 4.0e-31 138.7 178 44.9
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 4.0e-31 138.7 186 45.7
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 6.8e-31 137.9 179 43.6
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.2e-30 137.1 190 44.2
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 2.6e-30 136.0 184 41.8
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.6e-30 136.0 184 41.8
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 2.6e-30 136.0 187 42.8
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 3.4e-30 135.6 179 44.7
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.4e-30 135.6 184 41.8
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.4e-30 135.6 184 41.8
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 4.4e-30 135.2 177 45.2
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 4.4e-30 135.2 190 44.2
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 4.4e-30 135.2 184 42.4
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 5.7e-30 134.8 154 51.9
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 5.7e-30 134.8 170 47.6
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 7.5e-30 134.4 190 43.7
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.3e-29 133.7 175 43.4
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 2.2e-29 132.9 182 44.0
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.7e-29 132.1 189 45.5
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 1.4e-28 130.2 143 55.2
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 1.8e-28 129.8 125 56.0
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.8e-28 129.8 181 43.1
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 2.4e-28 129.4 175 45.1
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 2.4e-28 129.4 145 49.0
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 3.2e-28 129.0 186 42.5
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 9.2e-28 127.5 178 45.5
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 9.2e-28 127.5 189 41.8
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 9.2e-28 127.5 148 48.0
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 3.5e-27 125.6 151 48.3
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 4.6e-27 125.2 153 44.4
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 7.8e-27 124.4 151 45.0
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 1.3e-26 123.6 138 50.7
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 3.0e-26 122.5 189 39.2
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 3.9e-26 122.1 140 47.1
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 3.9e-26 122.1 147 50.3
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 5.0e-26 121.7 142 49.3
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 2.8e-24 115.9 166 40.4
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 2.8e-24 115.9 148 47.3
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 8.0e-24 114.4 148 48.0
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 4.0e-23 112.1 147 44.9
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 2.0e-22 109.8 199 37.2
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 2.6e-22 109.4 185 37.3
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.1e-20 104.0 178 33.1
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 4.1e-20 102.1 132 43.9
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 3.5e-19 99.0 176 36.9
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 4.6e-19 98.6 145 41.4
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 7.8e-19 97.8 197 36.5
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 1.7e-18 96.7 156 39.7
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 6.8e-15 84.7 118 46.6
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 6.6e-10 68.2 181 30.9
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 2.5e-09 66.2 113 38.9
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 9.5e-09 64.3 30 90.0
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 1.2e-08 63.9 75 42.7
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 1.2e-08 63.9 75 42.7
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 1.4e-07 60.5 88 38.6
CBR_g22983 Chara braunii HOM05D007009 ORTHO05D008451 3.4e-06 55.8 93 38.7


User provided reference genes

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